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Python utils.object_diff函数代码示例

原作者: [db:作者] 来自: [db:来源] 收藏 邀请

本文整理汇总了Python中mne.utils.object_diff函数的典型用法代码示例。如果您正苦于以下问题:Python object_diff函数的具体用法?Python object_diff怎么用?Python object_diff使用的例子?那么恭喜您, 这里精选的函数代码示例或许可以为您提供帮助。



在下文中一共展示了object_diff函数的12个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于我们的系统推荐出更棒的Python代码示例。

示例1: test_cross_talk

def test_cross_talk():
    """Test Maxwell filter cross-talk cancellation"""
    raw = Raw(raw_fname, allow_maxshield='yes').crop(0., 1., False)
    raw.info['bads'] = bads
    sss_ctc = Raw(sss_ctc_fname)
    raw_sss = maxwell_filter(raw, cross_talk=ctc_fname,
                             origin=mf_head_origin, regularize=None,
                             bad_condition='ignore')
    assert_meg_snr(raw_sss, sss_ctc, 275.)
    py_ctc = raw_sss.info['proc_history'][0]['max_info']['sss_ctc']
    assert_true(len(py_ctc) > 0)
    assert_raises(ValueError, maxwell_filter, raw, cross_talk=raw)
    assert_raises(ValueError, maxwell_filter, raw, cross_talk=raw_fname)
    mf_ctc = sss_ctc.info['proc_history'][0]['max_info']['sss_ctc']
    del mf_ctc['block_id']  # we don't write this
    assert_equal(object_diff(py_ctc, mf_ctc), '')
    raw_ctf = Raw(fname_ctf_raw)
    assert_raises(ValueError, maxwell_filter, raw_ctf)  # cannot fit headshape
    raw_sss = maxwell_filter(raw_ctf, origin=(0., 0., 0.04))
    _assert_n_free(raw_sss, 68)
    raw_sss = maxwell_filter(raw_ctf, origin=(0., 0., 0.04), ignore_ref=True)
    _assert_n_free(raw_sss, 70)
    raw_missing = raw.crop(0, 0.1, copy=True).load_data().pick_channels(
        [raw.ch_names[pi] for pi in pick_types(raw.info, meg=True,
                                               exclude=())[3:]])
    with warnings.catch_warnings(record=True) as w:
        maxwell_filter(raw_missing, cross_talk=ctc_fname)
    assert_equal(len(w), 1)
    assert_true('Not all cross-talk channels in raw' in str(w[0].message))
    # MEG channels not in cross-talk
    assert_raises(RuntimeError, maxwell_filter, raw_ctf, origin=(0., 0., 0.04),
                  cross_talk=ctc_fname)
开发者ID:souravsingh,项目名称:mne-python,代码行数:32,代码来源:test_maxwell.py


示例2: test_hash

def test_hash():
    """Test dictionary hashing and comparison functions"""
    # does hashing all of these types work:
    # {dict, list, tuple, ndarray, str, float, int, None}
    d0 = dict(a=dict(a=0.1, b='fo', c=1), b=[1, 'b'], c=(), d=np.ones(3))
    d0[1] = None
    d0[2.] = b'123'

    d1 = deepcopy(d0)
    print(object_diff(d0, d1))
    assert_equal(object_hash(d0), object_hash(d1))

    # change values slightly
    d1['data'] = np.ones(3, int)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    print(object_diff(d0, d1))
    assert_equal(object_hash(d0), object_hash(d1))
    d1['a']['a'] = 0.11
    object_diff(d0, d1)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    print(object_diff(d0, d1))
    assert_equal(object_hash(d0), object_hash(d1))
    d1[1] = 2
    object_diff(d0, d1)
    assert_not_equal(object_hash(d0), object_hash(d1))
    # generators (and other types) not supported
    d1[1] = (x for x in d0)
    assert_raises(RuntimeError, object_hash, d1)
开发者ID:lengyelgabor,项目名称:mne-python,代码行数:32,代码来源:test_utils.py


示例3: test_hdf5

def test_hdf5():
    """Test HDF5 IO
    """
    test_file = op.join(tempdir, 'test.hdf5')
    x = dict(a=dict(b=np.zeros(3)), c=np.zeros(2, np.complex128),
             d=[dict(e=(1, -2., 'hello', u'goodbyeu\u2764')), None])
    write_hdf5(test_file, 1)
    assert_equal(read_hdf5(test_file), 1)
    assert_raises(IOError, write_hdf5, test_file, x)  # file exists
    write_hdf5(test_file, x, overwrite=True)
    assert_raises(IOError, read_hdf5, test_file + 'FOO')  # not found
    xx = read_hdf5(test_file)
    assert_true(object_diff(x, xx) == '')  # no assert_equal, ugly output
开发者ID:dengemann,项目名称:mne-python,代码行数:13,代码来源:test_hdf5.py


示例4: test_cross_talk

def test_cross_talk():
    """Test Maxwell filter cross-talk cancellation"""
    with warnings.catch_warnings(record=True):  # maxshield
        raw = Raw(raw_fname, allow_maxshield=True).crop(0.0, 1.0, False)
    raw.info["bads"] = bads
    sss_ctc = Raw(sss_ctc_fname)
    raw_sss = maxwell_filter(raw, cross_talk=ctc_fname, origin=mf_head_origin, regularize=None, bad_condition="ignore")
    assert_meg_snr(raw_sss, sss_ctc, 275.0)
    py_ctc = raw_sss.info["proc_history"][0]["max_info"]["sss_ctc"]
    assert_true(len(py_ctc) > 0)
    assert_raises(ValueError, maxwell_filter, raw, cross_talk=raw)
    assert_raises(ValueError, maxwell_filter, raw, cross_talk=raw_fname)
    mf_ctc = sss_ctc.info["proc_history"][0]["max_info"]["sss_ctc"]
    del mf_ctc["block_id"]  # we don't write this
    assert_equal(object_diff(py_ctc, mf_ctc), "")
开发者ID:zuxfoucault,项目名称:mne-python,代码行数:15,代码来源:test_maxwell.py


示例5: test_maxwell_filter_cross_talk

def test_maxwell_filter_cross_talk():
    """Test Maxwell filter cross-talk cancellation"""
    with warnings.catch_warnings(record=True):  # maxshield
        raw = Raw(raw_fname, allow_maxshield=True).crop(0., 1., False)
    raw.info['bads'] = bads
    sss_ctc = Raw(sss_ctc_fname)
    raw_sss = maxwell_filter(raw, cross_talk=ctc_fname)
    _assert_snr(raw_sss, sss_ctc, 275.)
    py_ctc = raw_sss.info['proc_history'][0]['max_info']['sss_ctc']
    assert_true(len(py_ctc) > 0)
    assert_raises(ValueError, maxwell_filter, raw, cross_talk=raw)
    assert_raises(ValueError, maxwell_filter, raw, cross_talk=raw_fname)
    mf_ctc = sss_ctc.info['proc_history'][0]['max_info']['sss_ctc']
    del mf_ctc['block_id']  # we don't write this
    assert_equal(object_diff(py_ctc, mf_ctc), '')
开发者ID:msarahan,项目名称:mne-python,代码行数:15,代码来源:test_maxwell.py


示例6: test_io_surface

def test_io_surface():
    """Test reading and writing of Freesurfer surface mesh files."""
    tempdir = _TempDir()
    fname_quad = op.join(data_path, 'subjects', 'bert', 'surf',
                         'lh.inflated.nofix')
    fname_tri = op.join(data_path, 'subjects', 'fsaverage', 'surf',
                        'lh.inflated')
    for fname in (fname_quad, fname_tri):
        with pytest.warns(None):  # no volume info
            pts, tri, vol_info = read_surface(fname, read_metadata=True)
        write_surface(op.join(tempdir, 'tmp'), pts, tri, volume_info=vol_info)
        with pytest.warns(None):  # no volume info
            c_pts, c_tri, c_vol_info = read_surface(op.join(tempdir, 'tmp'),
                                                    read_metadata=True)
        assert_array_equal(pts, c_pts)
        assert_array_equal(tri, c_tri)
        assert_equal(object_diff(vol_info, c_vol_info), '')
开发者ID:Eric89GXL,项目名称:mne-python,代码行数:17,代码来源:test_surface.py


示例7: test_cross_talk

def test_cross_talk():
    """Test Maxwell filter cross-talk cancellation."""
    raw = read_crop(raw_fname, (0., 1.))
    raw.info['bads'] = bads
    sss_ctc = read_crop(sss_ctc_fname)
    raw_sss = maxwell_filter(raw, cross_talk=ctc_fname,
                             origin=mf_head_origin, regularize=None,
                             bad_condition='ignore')
    assert_meg_snr(raw_sss, sss_ctc, 275.)
    py_ctc = raw_sss.info['proc_history'][0]['max_info']['sss_ctc']
    assert_true(len(py_ctc) > 0)
    assert_raises(ValueError, maxwell_filter, raw, cross_talk=raw)
    assert_raises(ValueError, maxwell_filter, raw, cross_talk=raw_fname)
    mf_ctc = sss_ctc.info['proc_history'][0]['max_info']['sss_ctc']
    del mf_ctc['block_id']  # we don't write this
    assert isinstance(py_ctc['decoupler'], sparse.csc_matrix)
    assert isinstance(mf_ctc['decoupler'], sparse.csc_matrix)
    assert_array_equal(py_ctc['decoupler'].toarray(),
                       mf_ctc['decoupler'].toarray())
    # I/O roundtrip
    tempdir = _TempDir()
    fname = op.join(tempdir, 'test_sss_raw.fif')
    sss_ctc.save(fname)
    sss_ctc_read = read_raw_fif(fname)
    mf_ctc_read = sss_ctc_read.info['proc_history'][0]['max_info']['sss_ctc']
    assert isinstance(mf_ctc_read['decoupler'], sparse.csc_matrix)
    assert_array_equal(mf_ctc_read['decoupler'].toarray(),
                       mf_ctc['decoupler'].toarray())
    assert_equal(object_diff(py_ctc, mf_ctc), '')
    raw_ctf = read_crop(fname_ctf_raw).apply_gradient_compensation(0)
    assert_raises(ValueError, maxwell_filter, raw_ctf)  # cannot fit headshape
    raw_sss = maxwell_filter(raw_ctf, origin=(0., 0., 0.04))
    _assert_n_free(raw_sss, 68)
    raw_sss = maxwell_filter(raw_ctf, origin=(0., 0., 0.04), ignore_ref=True)
    _assert_n_free(raw_sss, 70)
    raw_missing = raw.copy().crop(0, 0.1).load_data().pick_channels(
        [raw.ch_names[pi] for pi in pick_types(raw.info, meg=True,
                                               exclude=())[3:]])
    with warnings.catch_warnings(record=True) as w:
        maxwell_filter(raw_missing, cross_talk=ctc_fname)
    assert_equal(len(w), 1)
    assert_true('Not all cross-talk channels in raw' in str(w[0].message))
    # MEG channels not in cross-talk
    assert_raises(RuntimeError, maxwell_filter, raw_ctf, origin=(0., 0., 0.04),
                  cross_talk=ctc_fname)
开发者ID:Lx37,项目名称:mne-python,代码行数:45,代码来源:test_maxwell.py


示例8: test_io_surface

def test_io_surface():
    """Test reading and writing of Freesurfer surface mesh files."""
    tempdir = _TempDir()
    fname_quad = op.join(data_path, 'subjects', 'bert', 'surf',
                         'lh.inflated.nofix')
    fname_tri = op.join(data_path, 'subjects', 'fsaverage', 'surf',
                        'lh.inflated')
    for fname in (fname_quad, fname_tri):
        with warnings.catch_warnings(record=True) as w:
            pts, tri, vol_info = read_surface(fname, read_metadata=True)
        assert_true(all('No volume info' in str(ww.message) for ww in w))
        write_surface(op.join(tempdir, 'tmp'), pts, tri, volume_info=vol_info)
        with warnings.catch_warnings(record=True) as w:  # No vol info
            c_pts, c_tri, c_vol_info = read_surface(op.join(tempdir, 'tmp'),
                                                    read_metadata=True)
        assert_array_equal(pts, c_pts)
        assert_array_equal(tri, c_tri)
        assert_equal(object_diff(vol_info, c_vol_info), '')
开发者ID:jdammers,项目名称:mne-python,代码行数:18,代码来源:test_surface.py


示例9: test_hash

def test_hash():
    """Test dictionary hashing and comparison functions."""
    # does hashing all of these types work:
    # {dict, list, tuple, ndarray, str, float, int, None}
    d0 = dict(a=dict(a=0.1, b='fo', c=1), b=[1, 'b'], c=(), d=np.ones(3),
              e=None)
    d0[1] = None
    d0[2.] = b'123'

    d1 = deepcopy(d0)
    assert_true(len(object_diff(d0, d1)) == 0)
    assert_true(len(object_diff(d1, d0)) == 0)
    assert_equal(object_hash(d0), object_hash(d1))

    # change values slightly
    d1['data'] = np.ones(3, int)
    d1['d'][0] = 0
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    assert_equal(object_hash(d0), object_hash(d1))
    d1['a']['a'] = 0.11
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    assert_equal(object_hash(d0), object_hash(d1))
    d1['a']['d'] = 0  # non-existent key
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    assert_equal(object_hash(d0), object_hash(d1))
    d1['b'].append(0)  # different-length lists
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    assert_equal(object_hash(d0), object_hash(d1))
    d1['e'] = 'foo'  # non-None
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    d2 = deepcopy(d0)
    d1['e'] = StringIO()
    d2['e'] = StringIO()
    d2['e'].write('foo')
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)

    d1 = deepcopy(d0)
    d1[1] = 2
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    # generators (and other types) not supported
    d1 = deepcopy(d0)
    d2 = deepcopy(d0)
    d1[1] = (x for x in d0)
    d2[1] = (x for x in d0)
    assert_raises(RuntimeError, object_diff, d1, d2)
    assert_raises(RuntimeError, object_hash, d1)

    x = sparse.eye(2, 2, format='csc')
    y = sparse.eye(2, 2, format='csr')
    assert_true('type mismatch' in object_diff(x, y))
    y = sparse.eye(2, 2, format='csc')
    assert_equal(len(object_diff(x, y)), 0)
    y[1, 1] = 2
    assert_true('elements' in object_diff(x, y))
    y = sparse.eye(3, 3, format='csc')
    assert_true('shape' in object_diff(x, y))
    y = 0
    assert_true('type mismatch' in object_diff(x, y))
开发者ID:hoechenberger,项目名称:mne-python,代码行数:80,代码来源:test_utils.py


示例10: test_make_dics


#.........这里部分代码省略.........

    # Test invalid combinations of parameters
    raises(NotImplementedError, make_dics, epochs.info, fwd_free, csd,
           reduce_rank=True, pick_ori=None)
    raises(NotImplementedError, make_dics, epochs.info, fwd_free, csd,
           reduce_rank=True, pick_ori='max-power', inversion='single')

    # Sanity checks on the returned filters
    n_freq = len(csd.frequencies)
    vertices = np.intersect1d(label.vertices, fwd_free['src'][0]['vertno'])
    n_verts = len(vertices)
    n_orient = 3
    n_channels = csd.n_channels

    # Test return values
    filters = make_dics(epochs.info, fwd_surf, csd, label=label, pick_ori=None,
                        weight_norm='unit-noise-gain')
    assert filters['weights'].shape == (n_freq, n_verts * n_orient, n_channels)
    assert np.iscomplexobj(filters['weights'])
    assert filters['csd'] == csd
    assert filters['ch_names'] == csd.ch_names
    assert_array_equal(filters['proj'], np.eye(n_channels))
    assert_array_equal(filters['vertices'][0], vertices)
    assert_array_equal(filters['vertices'][1], [])  # Label was on the LH
    assert filters['subject'] == fwd_free['src'][0]['subject_his_id']
    assert filters['pick_ori'] is None
    assert filters['n_orient'] == n_orient
    assert filters['inversion'] == 'single'
    assert filters['normalize_fwd']
    assert filters['weight_norm'] == 'unit-noise-gain'
    assert 'DICS' in repr(filters)
    assert 'subject "sample"' in repr(filters)
    assert '13' in repr(filters)
    assert '62' in repr(filters)
    assert 'rank' not in repr(filters)
    _test_weight_norm(filters)

    # Test picking orientations. Also test weight norming under these different
    # conditions.
    filters = make_dics(epochs.info, fwd_surf, csd, label=label,
                        pick_ori='normal', weight_norm='unit-noise-gain')
    n_orient = 1
    assert filters['weights'].shape == (n_freq, n_verts * n_orient, n_channels)
    assert filters['n_orient'] == n_orient
    _test_weight_norm(filters)

    filters = make_dics(epochs.info, fwd_surf, csd, label=label,
                        pick_ori='max-power', weight_norm='unit-noise-gain')
    n_orient = 1
    assert filters['weights'].shape == (n_freq, n_verts * n_orient, n_channels)
    assert filters['n_orient'] == n_orient
    _test_weight_norm(filters)

    # From here on, only work on a single frequency
    csd = csd[0]

    # Test using a real-valued filter
    filters = make_dics(epochs.info, fwd_surf, csd, label=label,
                        pick_ori='normal', real_filter=True)
    assert not np.iscomplexobj(filters['weights'])

    # Test forward normalization. When inversion='single', the power of a
    # unit-noise CSD should be 1, even without weight normalization.
    csd_noise = csd.copy()
    inds = np.triu_indices(csd.n_channels)
    # Using [:, :] syntax for in-place broadcasting
    csd_noise._data[:, :] = np.eye(csd.n_channels)[inds][:, np.newaxis]
    filters = make_dics(epochs.info, fwd_surf, csd_noise, label=label,
                        weight_norm=None, normalize_fwd=True)
    w = filters['weights'][0][:3]
    assert_allclose(np.diag(w.dot(w.T)), 1.0, rtol=1e-6, atol=0)

    # Test turning off both forward and weight normalization
    filters = make_dics(epochs.info, fwd_surf, csd, label=label,
                        weight_norm=None, normalize_fwd=False)
    w = filters['weights'][0][:3]
    assert not np.allclose(np.diag(w.dot(w.T)), 1.0, rtol=1e-2, atol=0)

    # Test neural-activity-index weight normalization. It should be a scaled
    # version of the unit-noise-gain beamformer.
    filters_nai = make_dics(epochs.info, fwd_surf, csd, label=label,
                            weight_norm='nai', normalize_fwd=False)
    w_nai = filters_nai['weights'][0]
    filters_ung = make_dics(epochs.info, fwd_surf, csd, label=label,
                            weight_norm='unit-noise-gain', normalize_fwd=False)
    w_ung = filters_ung['weights'][0]
    assert np.allclose(np.corrcoef(np.abs(w_nai).ravel(),
                                   np.abs(w_ung).ravel()), 1)

    # Test whether spatial filter contains src_type
    assert 'src_type' in filters

    fname = op.join(str(tmpdir), 'filters-dics.h5')
    filters.save(fname)
    filters_read = read_beamformer(fname)
    assert isinstance(filters, Beamformer)
    assert isinstance(filters_read, Beamformer)
    for key in ['tmin', 'tmax']:  # deal with strictness of object_diff
        setattr(filters['csd'], key, np.float(getattr(filters['csd'], key)))
    assert object_diff(filters, filters_read) == ''
开发者ID:jhouck,项目名称:mne-python,代码行数:101,代码来源:test_dics.py


示例11: test_hash

def test_hash():
    """Test dictionary hashing and comparison functions"""
    # does hashing all of these types work:
    # {dict, list, tuple, ndarray, str, float, int, None}
    d0 = dict(a=dict(a=0.1, b="fo", c=1), b=[1, "b"], c=(), d=np.ones(3), e=None)
    d0[1] = None
    d0[2.0] = b"123"

    d1 = deepcopy(d0)
    assert_true(len(object_diff(d0, d1)) == 0)
    assert_true(len(object_diff(d1, d0)) == 0)
    assert_equal(object_hash(d0), object_hash(d1))

    # change values slightly
    d1["data"] = np.ones(3, int)
    d1["d"][0] = 0
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    assert_equal(object_hash(d0), object_hash(d1))
    d1["a"]["a"] = 0.11
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    assert_equal(object_hash(d0), object_hash(d1))
    d1["a"]["d"] = 0  # non-existent key
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    assert_equal(object_hash(d0), object_hash(d1))
    d1["b"].append(0)  # different-length lists
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    assert_equal(object_hash(d0), object_hash(d1))
    d1["e"] = "foo"  # non-None
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    d1 = deepcopy(d0)
    d2 = deepcopy(d0)
    d1["e"] = StringIO()
    d2["e"] = StringIO()
    d2["e"].write("foo")
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)

    d1 = deepcopy(d0)
    d1[1] = 2
    assert_true(len(object_diff(d0, d1)) > 0)
    assert_true(len(object_diff(d1, d0)) > 0)
    assert_not_equal(object_hash(d0), object_hash(d1))

    # generators (and other types) not supported
    d1 = deepcopy(d0)
    d2 = deepcopy(d0)
    d1[1] = (x for x in d0)
    d2[1] = (x for x in d0)
    assert_raises(RuntimeError, object_diff, d1, d2)
    assert_raises(RuntimeError, object_hash, d1)

    x = sparse.eye(2, 2, format="csc")
    y = sparse.eye(2, 2, format="csr")
    assert_true("type mismatch" in object_diff(x, y))
    y = sparse.eye(2, 2, format="csc")
    assert_equal(len(object_diff(x, y)), 0)
    y[1, 1] = 2
    assert_true("elements" in object_diff(x, y))
    y = sparse.eye(3, 3, format="csc")
    assert_true("shape" in object_diff(x, y))
    y = 0
    assert_true("type mismatch" in object_diff(x, y))
开发者ID:agramfort,项目名称:mne-python,代码行数:79,代码来源:test_utils.py


示例12: test_make_lcmv


#.........这里部分代码省略.........
                        pick_ori='max-power', reduce_rank=True)
    stc_sphere = apply_lcmv(evoked, filters, max_ori_out='signed')
    stc_sphere = np.abs(stc_sphere)
    stc_sphere.crop(0.02, None)

    stc_pow = np.sum(stc_sphere.data, axis=1)
    idx = np.argmax(stc_pow)
    max_stc = stc_sphere.data[idx]
    tmax = stc_sphere.times[np.argmax(max_stc)]

    assert 0.08 < tmax < 0.15, tmax
    assert 0.4 < np.max(max_stc) < 2., np.max(max_stc)

    # Test if spatial filter contains src_type
    assert 'src_type' in filters

    # __repr__
    assert 'LCMV' in repr(filters)
    assert 'unknown subject' not in repr(filters)
    assert '484' in repr(filters)
    assert '20' in repr(filters)
    assert 'rank 17' in repr(filters)

    # I/O
    fname = op.join(str(tmpdir), 'filters.h5')
    with pytest.warns(RuntimeWarning, match='-lcmv.h5'):
        filters.save(fname)
    filters_read = read_beamformer(fname)
    assert isinstance(filters, Beamformer)
    assert isinstance(filters_read, Beamformer)
    # deal with object_diff strictness
    filters_read['rank'] = int(filters_read['rank'])
    filters['rank'] = int(filters['rank'])
    assert object_diff(filters, filters_read) == ''

    # Test if fixed forward operator is detected when picking normal or
    # max-power orientation
    pytest.raises(ValueError, make_lcmv, evoked.info, forward_fixed, data_cov,
                  reg=0.01, noise_cov=noise_cov, pick_ori='normal')
    pytest.raises(ValueError, make_lcmv, evoked.info, forward_fixed, data_cov,
                  reg=0.01, noise_cov=noise_cov, pick_ori='max-power')

    # Test if non-surface oriented forward operator is detected when picking
    # normal orientation
    pytest.raises(ValueError, make_lcmv, evoked.info, forward, data_cov,
                  reg=0.01, noise_cov=noise_cov, pick_ori='normal')

    # Test if volume forward operator is detected when picking normal
    # orientation
    pytest.raises(ValueError, make_lcmv, evoked.info, forward_vol, data_cov,
                  reg=0.01, noise_cov=noise_cov, pick_ori='normal')

    # Test if missing of noise covariance matrix is detected when more than
    # one channel type is present in the data
    pytest.raises(ValueError, make_lcmv, evoked.info, forward_vol,
                  data_cov=data_cov, reg=0.01, noise_cov=None,
                  pick_ori='max-power')

    # Test if wrong channel selection is detected in application of filter
    evoked_ch = deepcopy(evoked)
    evoked_ch.pick_channels(evoked_ch.ch_names[1:])
    filters = make_lcmv(evoked.info, forward_vol, data_cov, reg=0.01,
                        noise_cov=noise_cov)
    pytest.raises(ValueError, apply_lcmv, evoked_ch, filters,
                  max_ori_out='signed')
开发者ID:kambysese,项目名称:mne-python,代码行数:66,代码来源:test_lcmv.py



注:本文中的mne.utils.object_diff函数示例由纯净天空整理自Github/MSDocs等源码及文档管理平台,相关代码片段筛选自各路编程大神贡献的开源项目,源码版权归原作者所有,传播和使用请参考对应项目的License;未经允许,请勿转载。


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