public void test_XMLNode_clearAttributes()
 {
     XMLTriple triple = new  XMLTriple("test","","");
       XMLAttributes attr = new  XMLAttributes();
       XMLNode node = new XMLNode(triple,attr);
       XMLTriple xt2 = new  XMLTriple("name3",  "http://name3.org/", "p3");
       XMLTriple xt1 = new  XMLTriple("name5",  "http://name5.org/", "p5");
       int i = node.addAttr( "name1", "val1");
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertTrue( node.getAttributes().getLength() == 1 );
       i = node.addAttr( "name2", "val2",  "http://name1.org/", "p1");
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertTrue( node.getAttributes().getLength() == 2 );
       i = node.addAttr(xt2, "val2");
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertTrue( node.getAttributes().getLength() == 3 );
       i = node.addAttr( "name4", "val4");
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertTrue( node.getAttributes().getLength() == 4 );
       i = node.clearAttributes();
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertTrue( node.getAttributes().getLength() == 0 );
       xt1 = null;
       xt2 = null;
       triple = null;
       attr = null;
       node = null;
 }

 public void test_Node_clone()
 {
     XMLAttributes att = new XMLAttributes();
       XMLTriple t = new XMLTriple("sarah", "http://foo.org/", "bar");
       XMLToken token = new XMLToken(t,att,3,4);
       XMLNode node = new XMLNode(token);
       XMLNode child = new XMLNode();
       node.addChild(child);
       assertTrue( node.getNumChildren() == 1 );
       assertTrue( node.getName() ==  "sarah" );
       assertTrue( node.getURI() ==  "http://foo.org/" );
       assertTrue( node.getPrefix() ==  "bar" );
       assertTrue( node.isEnd() == false );
       assertTrue( node.isEOF() == false );
       assertTrue( node.getLine() == 3 );
       assertTrue( node.getColumn() == 4 );
       XMLNode node2 = (XMLNode) node.clone();
       assertTrue( node2.getNumChildren() == 1 );
       assertTrue( node2.getName() ==  "sarah" );
       assertTrue( node2.getURI() ==  "http://foo.org/" );
       assertTrue( node2.getPrefix() ==  "bar" );
       assertTrue( node2.isEnd() == false );
       assertTrue( node2.isEOF() == false );
       assertTrue( node2.getLine() == 3 );
       assertTrue( node2.getColumn() == 4 );
       t = null;
       token = null;
       node = null;
       node2 = null;
 }

 public void test_XMLNode_addChild1()
 {
     XMLNode node = new XMLNode();
       XMLNode node2 = new XMLNode();
       int i = node.addChild(node2);
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertTrue( node.getNumChildren() == 1 );
       node = null;
       node2 = null;
 }

 public void test_XMLNode_addChild3()
 {
     XMLTriple triple = new  XMLTriple("test","","");
       XMLNode node = new XMLNode(triple);
       XMLNode node2 = new XMLNode();
       int i = node.addChild(node2);
       assertTrue( i == libsbml.LIBSBML_INVALID_XML_OPERATION );
       assertTrue( node.getNumChildren() == 0 );
       triple = null;
       node = null;
       node2 = null;
 }

 public void test_ASTNode_addSemanticsAnnotation()
 {
     XMLNode ann = new XMLNode();
       ASTNode node = new  ASTNode();
       int i = 0;
       i = node.addSemanticsAnnotation(ann);
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertTrue( node.getNumSemanticsAnnotations() == 1 );
       i = node.addSemanticsAnnotation(null);
       assertTrue( i == libsbml.LIBSBML_OPERATION_FAILED );
       assertTrue( node.getNumSemanticsAnnotations() == 1 );
       node = null;
 }

 public void test_XMLNode_addChild2()
 {
     XMLTriple triple = new  XMLTriple("test","","");
       XMLAttributes attr = new  XMLAttributes();
       XMLNode node = new XMLNode(triple,attr);
       XMLNode node2 = new XMLNode();
       int i = node.addChild(node2);
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertTrue( node.getNumChildren() == 1 );
       triple = null;
       attr = null;
       node = null;
       node2 = null;
 }

 public void test_Constraint_setMessage1()
 {
     XMLNode node = new XMLNode();
       int i = C.setMessage(node);
       assertTrue( i == libsbml.LIBSBML_INVALID_OBJECT );
       assertTrue( C.isSetMessage() == false );
       i = C.unsetMessage();
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       assertEquals( false, C.isSetMessage() );
       if (C.getMessage() != null);
       {
       }
       node = null;
 }

 public void test_SyntaxChecker_validXHTML()
 {
     SBMLNamespaces NS24 = new  SBMLNamespaces(2,4);
       SBMLNamespaces NS31 = new  SBMLNamespaces(3,1);
       XMLToken toptoken;
       XMLNode topnode;
       XMLTriple toptriple = new  XMLTriple("notes", "", "");
       XMLToken token;
       XMLNode node;
       XMLTriple triple = new  XMLTriple("p", "", "");
       XMLAttributes att = new  XMLAttributes();
       XMLNamespaces ns = new  XMLNamespaces();
       ns.add( "http://www.w3.org/1999/xhtml", "");
       XMLToken tt = new  XMLToken("This is my text");
       XMLNode n1 = new XMLNode(tt);
       toptoken = new  XMLToken(toptriple,att);
       topnode = new XMLNode(toptoken);
       token = new  XMLToken(triple,att,ns);
       node = new XMLNode(token);
       node.addChild(n1);
       topnode.addChild(node);
       assertTrue( SyntaxChecker.hasExpectedXHTMLSyntax(topnode,null) == true );
       assertTrue( SyntaxChecker.hasExpectedXHTMLSyntax(topnode,NS24) == true );
       assertTrue( SyntaxChecker.hasExpectedXHTMLSyntax(topnode,NS31) == true );
       triple = new  XMLTriple("html", "", "");
       token = new  XMLToken(triple,att,ns);
       node = new XMLNode(token);
       node.addChild(n1);
       topnode.removeChild(0);
       topnode.addChild(node);
       assertTrue( SyntaxChecker.hasExpectedXHTMLSyntax(topnode,null) == true );
       assertTrue( SyntaxChecker.hasExpectedXHTMLSyntax(topnode,NS24) == false );
       assertTrue( SyntaxChecker.hasExpectedXHTMLSyntax(topnode,NS31) == true );
       triple = new  XMLTriple("html", "", "");
       ns.clear();
       token = new  XMLToken(triple,att,ns);
       node = new XMLNode(token);
       node.addChild(n1);
       topnode.removeChild(0);
       topnode.addChild(node);
       assertTrue( SyntaxChecker.hasExpectedXHTMLSyntax(topnode,null) == false );
       assertTrue( SyntaxChecker.hasExpectedXHTMLSyntax(topnode,NS24) == false );
       assertTrue( SyntaxChecker.hasExpectedXHTMLSyntax(topnode,NS31) == false );
 }

 public void test_CVTerm_createFromNode()
 {
     XMLAttributes xa;
       XMLTriple qual_triple = new  XMLTriple("is", "", "bqbiol");
       XMLTriple bag_triple = new  XMLTriple();
       XMLTriple li_triple = new  XMLTriple();
       XMLAttributes att = new  XMLAttributes();
       att.add( "", "This is my resource");
       XMLAttributes att1 = new  XMLAttributes();
       XMLToken li_token = new  XMLToken(li_triple,att);
       XMLToken bag_token = new  XMLToken(bag_triple,att1);
       XMLToken qual_token = new  XMLToken(qual_triple,att1);
       XMLNode li = new XMLNode(li_token);
       XMLNode bag = new XMLNode(bag_token);
       XMLNode node = new XMLNode(qual_token);
       bag.addChild(li);
       node.addChild(bag);
       CVTerm term = new  CVTerm(node);
       assertTrue( term != null );
       assertTrue( term.getQualifierType() == libsbml.BIOLOGICAL_QUALIFIER );
       assertTrue( term.getBiologicalQualifierType() == libsbml.BQB_IS );
       xa = term.getResources();
       assertTrue( xa.getLength() == 1 );
       assertTrue((  "rdf:resource" == xa.getName(0) ));
       assertTrue((  "This is my resource" == xa.getValue(0) ));
       qual_triple = null;
       bag_triple = null;
       li_triple = null;
       li_token = null;
       bag_token = null;
       qual_token = null;
       att = null;
       att1 = null;
       term = null;
       node = null;
       bag = null;
       li = null;
 }

 /**
    * Compare this XMLNode against another XMLNode returning true if both
    * nodes represent the same XML tree, or false otherwise.
    *
    * @param other another XMLNode to compare against.
    *
    * @param ignoreURI whether to ignore the namespace URI when doing the
    * comparison.
    *
    * @return bool indicating whether this XMLNode represents the same XML
    * tree as another.
    */
 public bool equals(XMLNode other)
 {
     bool ret = libsbmlPINVOKE.XMLNode_equals__SWIG_1(swigCPtr, XMLNode.getCPtr(other));
     if (libsbmlPINVOKE.SWIGPendingException.Pending) throw libsbmlPINVOKE.SWIGPendingException.Retrieve();
     return ret;
 }

 /**
    * Adds a copy of @p node as a child of this XMLNode.
    *
    * The given @p node is added at the end of the list of children.
    *
    * @param node the XMLNode to be added as child.
    *
    * @return integer value indicating success/failure of the
    * function.   The possible values
    * returned by this function are:
    * @li @link libsbmlcs#LIBSBML_OPERATION_SUCCESS [email protected]
    * @li @link libsbmlcs#LIBSBML_INVALID_XML_OPERATION [email protected]
    *
    * @note The given node is added at the end of the children list.
    */
 public int addChild(XMLNode node)
 {
     int ret = libsbmlPINVOKE.XMLNode_addChild(swigCPtr, XMLNode.getCPtr(node));
     if (libsbmlPINVOKE.SWIGPendingException.Pending) throw libsbmlPINVOKE.SWIGPendingException.Retrieve();
     return ret;
 }

 /**
    * Returns a string representation of a given XMLNode.
    *
    * @param node the XMLNode to be represented as a string
    *
    * @return a string-form representation of @p node
    */
 public static string convertXMLNodeToString(XMLNode node)
 {
     string ret = libsbmlPINVOKE.XMLNode_convertXMLNodeToString(XMLNode.getCPtr(node));
     return ret;
 }

 /**
    * Copy constructor; creates a copy of this XMLNode.
    *
    * @param orig the XMLNode instance to copy.
    *
    * @throws XMLConstructorException
    * Thrown if the argument @p orig is @c null.
    */
 public XMLNode(XMLNode orig)
     : this(libsbmlPINVOKE.new_XMLNode__SWIG_15(XMLNode.getCPtr(orig)), true)
 {
     if (libsbmlPINVOKE.SWIGPendingException.Pending) throw libsbmlPINVOKE.SWIGPendingException.Retrieve();
 }

 /**
    * Sets the value of the 'annotation' subelement of this SBML object to a
    * copy of @p annotation.
    *
    * Any existing content of the 'annotation' subelement is discarded.
    * Unless you have taken steps to first copy and reconstitute any
    * existing annotations into the @p annotation that is about to be
    * assigned, it is likely that performing such wholesale replacement is
    * unfriendly towards other software applications whose annotations are
    * discarded.  An alternative may be to use appendAnnotation().
    *
    * @param annotation an XML structure that is to be used as the content
    * of the 'annotation' subelement of this object
    *
    *
  * @return integer value indicating success/failure of the
  * function.  @if clike The value is drawn from the
  * enumeration #OperationReturnValues_t. @endif The possible values
  * returned by this function are:
  * @li @link libsbml#LIBSBML_OPERATION_SUCCESS [email protected]
    *
    * @see appendAnnotation(XMLNode annotation)
    */
 public new int setAnnotation(XMLNode annotation)
 {
     int ret = libsbmlPINVOKE.Model_setAnnotation__SWIG_0(swigCPtr, XMLNode.getCPtr(annotation));
     return ret;
 }

 /**
    * Appends the given @p annotation to the 'annotation' subelement of this
    * object.
    *
    * Whereas the SBase 'notes' subelement is a container for content to be
    * shown directly to humans, the 'annotation' element is a container for
    * optional software-generated content @em not meant to be shown to
    * humans.  Every object derived from SBase can have its own value for
    * 'annotation'.  The element's content type is <a
    * target='_blank'
    * href='http://www.w3.org/TR/2004/REC-xml-20040204/#elemdecls'>XML type 'any'</a>,
    * allowing essentially arbitrary well-formed XML data content.
    *
    * SBML places a few restrictions on the organization of the content of
    * annotations; these are intended to help software tools read and write
    * the data as well as help reduce conflicts between annotations added by
    * different tools.  Please see the SBML specifications for more details.
    *
    * Unlike SBase::setAnnotation(XMLNode annotation) or
    * SBase::setAnnotation(string annotation), this method
    * allows other annotations to be preserved when an application adds its
    * own data.
    *
    * @param annotation an XML structure that is to be copied and appended
    * to the content of the 'annotation' subelement of this object
    *
    * @return integer value indicating success/failure of the
    * function.  The possible values returned by this function are:
    * @li @link libsbmlcs.libsbml.LIBSBML_OPERATION_SUCCESS LIBSBML_OPERATION_SUCCESS @endlink
    * @li @link libsbmlcs.libsbml.LIBSBML_OPERATION_FAILED LIBSBML_OPERATION_FAILED @endlink
    *
    * @see getAnnotationString()
    * @see isSetAnnotation()
    * @see setAnnotation(XMLNode annotation)
    * @see setAnnotation(string annotation)
    * @see appendAnnotation(string annotation)
    * @see unsetAnnotation()
    */
 public int appendAnnotation(XMLNode annotation)
 {
     int ret = libsbmlPINVOKE.SBase_appendAnnotation__SWIG_0(swigCPtr, XMLNode.getCPtr(annotation));
     return ret;
 }

 /**
    * Inserts a copy of the given node as the <code>n</code>th child of this
    * XMLNode.
    *
    * If the given index @p n is out of range for this XMLNode instance,
    * the @p node is added at the end of the list of children.  Even in
    * that situation, this method does not throw an error.
    *
    * @param n an integer, the index at which the given node is inserted
    * @param node an XMLNode to be inserted as <code>n</code>th child.
    *
    * @return a reference to the newly-inserted child @p node
    */
 public XMLNode insertChild(long n, XMLNode node)
 {
     XMLNode ret = new XMLNode(libsbmlPINVOKE.XMLNode_insertChild(swigCPtr, n, XMLNode.getCPtr(node)), false);
     if (libsbmlPINVOKE.SWIGPendingException.Pending) throw libsbmlPINVOKE.SWIGPendingException.Retrieve();
     return ret;
 }

        internal static HandleRef getCPtrAndDisown(XMLNode obj)
        {
            HandleRef ptr = new HandleRef(null, IntPtr.Zero);

            if (obj != null)
            {
            ptr             = obj.swigCPtr;
            obj.swigCMemOwn = false;
            }

            return ptr;
        }

 /**
    * Returns the <code>n</code>th child of this XMLNode.
    *
    * If the index @p n is greater than the number of child nodes,
    * this method returns an empty node.
    *
    * @param n a long integereger, the index of the node to return
    *
    * @return the <code>n</code>th child of this XMLNode.
    */
 public XMLNode getChild(long n)
 {
     XMLNode ret = new XMLNode(libsbmlPINVOKE.XMLNode_getChild__SWIG_0(swigCPtr, n), false);
     return ret;
 }

 public void test_SBase_appendAnnotation()
 {
     XMLToken token;
       XMLNode node;
       XMLToken token1;
       XMLNode node1;
       XMLToken token_top;
       XMLNode node_top;
       XMLTriple triple = new XMLTriple("any", "", "pr");
       XMLAttributes att = new XMLAttributes();
       XMLNamespaces ns = new XMLNamespaces();
       ns.add("http://www.any", "pr");
       XMLToken token_top1;
       XMLNode node_top1;
       XMLTriple triple1 = new XMLTriple("anyOther", "", "prOther");
       XMLNamespaces ns1 = new XMLNamespaces();
       ns1.add("http://www.any.other", "prOther");
       token = new XMLToken("This is a test note");
       node = new XMLNode(token);
       token1 = new  XMLToken("This is additional");
       node1 = new XMLNode(token1);
       token_top = new XMLToken(triple, att, ns);
       node_top = new XMLNode(token_top);
       node_top.addChild(node);
       token_top1 = new XMLToken(triple1, att, ns1);
       node_top1 = new XMLNode(token_top1);
       node_top1.addChild(node1);
       int i = S.setAnnotation(node_top);
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       i = S.appendAnnotation(node_top1);
       XMLNode t1 = S.getAnnotation();
       assertTrue( t1.getNumChildren() == 2 );
       assertTrue((     "This is a test note" == t1.getChild(0).getChild(0).getCharacters() ));
       assertTrue((     "This is additional" == t1.getChild(1).getChild(0).getCharacters() ));
 }

 public void test_SBase_appendNotes8()
 {
     XMLAttributes att = new  XMLAttributes();
       XMLNamespaces ns = new  XMLNamespaces();
       ns.add( "http://www.w3.org/1999/xhtml", "");
       XMLTriple body_triple = new  XMLTriple("body", "", "");
       XMLTriple p_triple = new  XMLTriple("p", "", "");
       XMLToken body_token = new  XMLToken(body_triple,att,ns);
       XMLToken p_token = new  XMLToken(p_triple,att);
       XMLToken text_token = new  XMLToken("This is my text");
       XMLNode body_node = new XMLNode(body_token);
       XMLNode p_node = new XMLNode(p_token);
       XMLNode text_node = new XMLNode(text_token);
       XMLToken p_token1 = new  XMLToken(p_triple,att,ns);
       XMLToken text_token1 = new  XMLToken("This is more text");
       XMLNode p_node1 = new XMLNode(p_token1);
       XMLNode text_node1 = new XMLNode(text_token1);
       XMLNode notes;
       XMLNode child, child1;
       p_node.addChild(text_node);
       body_node.addChild(p_node);
       p_node1.addChild(text_node1);
       int i = S.setNotes(body_node);
       i = S.appendNotes(p_node1);
       assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
       notes = S.getNotes();
       assertTrue((  "notes" == notes.getName() ));
       assertTrue( notes.getNumChildren() == 1 );
       child = notes.getChild(0);
       assertTrue((  "body" == child.getName() ));
       assertTrue( child.getNumChildren() == 2 );
       child1 = child.getChild(0);
       assertTrue((  "p" == child1.getName() ));
       assertTrue( child1.getNumChildren() == 1 );
       child1 = child1.getChild(0);
       assertTrue((  "This is my text" == child1.getCharacters() ));
       assertTrue( child1.getNumChildren() == 0 );
       child1 = child.getChild(1);
       assertTrue((  "p" == child1.getName() ));
       assertTrue( child1.getNumChildren() == 1 );
       child1 = child1.getChild(0);
       assertTrue((  "This is more text" == child1.getCharacters() ));
       assertTrue( child1.getNumChildren() == 0 );
       att = null;
       ns = null;
       body_triple = null;
       p_triple = null;
       body_token = null;
       p_token = null;
       text_token = null;
       text_token1 = null;
       p_token1 = null;
       body_node = null;
       p_node = null;
       text_node = null;
       p_node1 = null;
       text_node1 = null;
 }