本文整理汇总了Java中beast.math.distributions.ParametricDistribution类的典型用法代码示例。如果您正苦于以下问题：Java ParametricDistribution类的具体用法？Java ParametricDistribution怎么用？Java ParametricDistribution使用的例子？那么恭喜您, 这里精选的类代码示例或许可以为您提供帮助。
ParametricDistribution类属于beast.math.distributions包，在下文中一共展示了ParametricDistribution类的12个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于我们的系统推荐出更棒的Java代码示例。
示例1: paintComponent
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
@Override
public void paintComponent(java.awt.Graphics g) {
Graphics2D g2d = (Graphics2D)g;
g2d.setRenderingHint(RenderingHints.KEY_ANTIALIASING, RenderingHints.VALUE_ANTIALIAS_ON);
// Record current font, since drawError can take over part-way
// through the call to drawGraph, which alters the graphics font size.
Font originalFont = g.getFont();
ParametricDistribution m_distr = (ParametricDistribution)m_input.get();
if (m_distr == null) {
drawError(g);
} else {
try {
m_distr.initAndValidate();
drawGraph(m_distr, 50, g);
} catch (Exception ex) {
System.out.println(ex.getMessage());
ex.printStackTrace();
g.setFont(originalFont);
drawError(g);
}
}
}
开发者ID:CompEvol，项目名称:beast2，代码行数:27，代码来源:ParametricDistributionInputEditor.java
示例2: getSamples
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
public QuietRealParameter[] getSamples(ParametricDistribution distr) throws Exception{
QuietRealParameter[] samples = new QuietRealParameter[sampleSize];
Double[][] sampleVals = distr.sample(sampleSize);
for(int i = 0; i < samples.length;i++){
samples[i] = new QuietRealParameter(sampleVals[i]);
}
return samples;
}
开发者ID:jessiewu，项目名称:substBMA，代码行数:9，代码来源:DirichletProcessPriorGibbsSampler.java
示例3: initAndValidate
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
public void initAndValidate(){
dp = dpInput.get();
List<ParametricDistribution> distrs = dp.getBaseDistributions();
paramBaseDistr = distrs.get(0);
modelBaseDistr = distrs.get(1);
freqsBaseDistr = distrs.get(2);
ratesBaseDistr = distrs.get(3);
sampleSize = sampleSizeInput.get();
dpVal = dpValuableInput.get();
dpTreeLikelihood = dpTreeLikelihoodInput.get();
}
开发者ID:jessiewu，项目名称:substBMA，代码行数:14，代码来源:NtdBMARateDPPGibbsSampler.java
示例4: getSamples
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
public QuietRealParameter[] getSamples(ParametricDistribution distr, RealParameter example) throws Exception{
QuietRealParameter[] samples = new QuietRealParameter[sampleSize];
Double[][] sampleVals = distr.sample(sampleSize);
for(int i = 0; i < samples.length;i++){
samples[i] = new QuietRealParameter(sampleVals[i]);
samples[i].setUpper(example.getUpper());
samples[i].setLower(example.getLower());
}
return samples;
}
开发者ID:jessiewu，项目名称:substBMA，代码行数:11，代码来源:NtdBMARateDPPGibbsSampler.java
示例5: initAndValidate
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
public void initAndValidate(){
paramList = paramListInput.get();
modelList = modelListInput.get();
freqsList = freqsListInput.get();
paramPointers = paramPointersInput.get();
modelPointers = modelPointersInput.get();
freqsPointers = freqsPointersInput.get();
pointerCount = paramPointers.getDimension();
dp = dpInput.get();
List<ParametricDistribution> distrs = dp.getBaseDistributions();
paramBaseDistr = distrs.get(0);
modelBaseDistr = distrs.get(1);
freqsBaseDistr = distrs.get(2);
tempLikelihood = tempLikelihoodInput.get();
dpTreeLikelihood = dpTreeLikelihoodInput.get();
modelNetworkMap.put(1.0,new double[]{3.0});
modelNetworkMap.put(2.0,new double[]{3.0});
modelNetworkMap.put(3.0,new double[]{1.0,2.0,4.0});
modelNetworkMap.put(4.0,new double[]{3.0,5.0});
modelNetworkMap.put(5.0,new double[]{4.0});
//System.out.println("is null? "+(modelNetworkMap.get(5.0) == null));
}
开发者ID:jessiewu，项目名称:substBMA，代码行数:30，代码来源:NtdBMASAMSTempOperator.java
示例6: initAndValidate
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
public void initAndValidate(){
testCorrect = testCorrectInput.get();
paramList = paramListInput.get();
modelList = modelListInput.get();
freqsList = freqsListInput.get();
paramPointers = paramPointersInput.get();
modelPointers = modelPointersInput.get();
freqsPointers = freqsPointersInput.get();
pointerCount = paramPointers.getDimension();
dp = dpInput.get();
List<ParametricDistribution> distrs = dp.getBaseDistributions();
paramBaseDistr = distrs.get(0);
modelBaseDistr = distrs.get(1);
freqsBaseDistr = distrs.get(2);
tempLikelihood = tempLikelihoodInput.get();
dpTreeLikelihood = dpTreeLikelihoodInput.get();
modelNetworkMap.put(1.0,new double[]{3.0});
modelNetworkMap.put(2.0,new double[]{3.0});
modelNetworkMap.put(3.0,new double[]{1.0,2.0,4.0});
modelNetworkMap.put(4.0,new double[]{3.0,5.0});
modelNetworkMap.put(5.0,new double[]{4.0});
//System.out.println("is null? "+(modelNetworkMap.get(5.0) == null));
}
开发者ID:jessiewu，项目名称:substBMA，代码行数:31，代码来源:NtdBMASAMSPriorOperator.java
示例7: initAndValidate
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
public void initAndValidate(){
paramList = paramListInput.get();
modelList = modelListInput.get();
freqsList = freqsListInput.get();
ratesList = ratesListInput.get();
paramPointers = paramPointersInput.get();
modelPointers = modelPointersInput.get();
freqsPointers = freqsPointersInput.get();
ratesPointers = ratesPointersInput.get();
pointerCount = paramPointers.getDimension();
dp = dpInput.get();
List<ParametricDistribution> distrs = dp.getBaseDistributions();
paramBaseDistr = distrs.get(0);
modelBaseDistr = distrs.get(1);
freqsBaseDistr = distrs.get(2);
ratesBaseDistr = distrs.get(3);
tempLikelihood = tempLikelihoodInput.get();
dpTreeLikelihood = dpTreeLikelihoodInput.get();
modelNetworkMap.put(1.0,new double[]{3.0});
modelNetworkMap.put(2.0,new double[]{3.0});
modelNetworkMap.put(3.0,new double[]{1.0,2.0,4.0});
modelNetworkMap.put(4.0,new double[]{3.0,5.0});
modelNetworkMap.put(5.0,new double[]{4.0});
//System.out.println("is null? "+(modelNetworkMap.get(5.0) == null));
}
开发者ID:jessiewu，项目名称:substBMA，代码行数:33，代码来源:NtdBMARateSAMSPriorOperator.java
示例8: initAndValidate
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
public void initAndValidate(){
testCorrect = testCorrectInput.get();
dp = dpInput.get();
List<ParametricDistribution> distrs = dp.getBaseDistributions();
paramBaseDistr = distrs.get(0);
modelBaseDistr = distrs.get(1);
freqsBaseDistr = distrs.get(2);
sampleSize = sampleSizeInput.get();
dpVal = dpValuableInput.get();
dpTreeLikelihood = dpTreeLikelihoodInput.get();
}
开发者ID:jessiewu，项目名称:substBMA，代码行数:14，代码来源:NtdBMADPPGibbsSampler.java
示例9: dist
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
public ParametricDistribution dist() {
return pd;
}
开发者ID:CompEvol，项目名称:beast2，代码行数:4，代码来源:CalibrationPoint.java
示例10: type
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
@Override
public Class<?> type() {
//return ParametricDistributionInputEditor.class;
return ParametricDistribution.class;
}
开发者ID:CompEvol，项目名称:beast2，代码行数:6，代码来源:ParametricDistributionInputEditor.java
示例11: getDensityForPlot
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
/**
* Returns the density of pDistr at x when pDistr is a density of a
* continuous variable, but returns the probability of the closest
* integer when pDistr is a probability distribution over an integer-valued
* parameter.
*
* @param pDistr
* @param x
* @return density at x or probability of closest integer to x
*/
private double getDensityForPlot(ParametricDistribution pDistr, double x) {
if (pDistr.isIntegerDistribution()) {
return pDistr.density((int) Math.round(x));
} else {
return pDistr.density(x);
}
}
开发者ID:CompEvol，项目名称:beast2，代码行数:18，代码来源:ParametricDistributionInputEditor.java
示例12: getSample
import beast.math.distributions.ParametricDistribution; //导入依赖的package包/类
public QuietRealParameter getSample(ParametricDistribution distr, double upper, double lower) throws Exception{
Double[][] sampleVals = distr.sample(1);
QuietRealParameter sampleParameter = new QuietRealParameter(sampleVals[0]);
sampleParameter.setUpper(upper);
sampleParameter.setLower(lower);
return sampleParameter;
}
开发者ID:jessiewu，项目名称:substBMA，代码行数:11，代码来源:NtdBMASAMSTempOperator.java
注：本文中的beast.math.distributions.ParametricDistribution类示例整理自Github/MSDocs等源码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。 |
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