Java RDFXMLDocumentFormat类代码示例

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本文整理汇总了Java中org.semanticweb.owlapi.formats.RDFXMLDocumentFormat类的典型用法代码示例。如果您正苦于以下问题：Java RDFXMLDocumentFormat类的具体用法？Java RDFXMLDocumentFormat怎么用？Java RDFXMLDocumentFormat使用的例子？那么恭喜您, 这里精选的类代码示例或许可以为您提供帮助。

RDFXMLDocumentFormat类属于org.semanticweb.owlapi.formats包，在下文中一共展示了RDFXMLDocumentFormat类的18个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于我们的系统推荐出更棒的Java代码示例。

示例1: export

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
@UITopiaVariant(
  author = "onprom team",
  affiliation = "Free University of Bozen-Bolzano",
  email = "[email protected]",
  website = "http://onprom.inf.unibz.it"
)
@PluginVariant(requiredParameterLabels = {0, 1})
public void export(PluginContext context, OWLOntology ontology, File file) {
  try {
    //default format is RDF/XML format for the ontology
    RDFDocumentFormat format = new RDFXMLDocumentFormat();
    //save the given ontology using the format to the file
    OWLManager.createOWLOntologyManager().saveOntology(ontology, format, new FileOutputStream(file));
    context.log("Exported ontology to the file: " + file.getName());
  } catch (Exception e) {
    context.log("Couldn't export ontology to the file: " + file.getName() + " ->" + e.getMessage());
  }
}

开发者ID:onprom，项目名称:onprom，代码行数:19，代码来源:OWLOntologyExportPlugin.java

示例2: headerOWL

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
public void headerOWL() {
	if (isOWLOntologyFormat()) {
		LOG.info("using OWL ontology header");
		OWLDocumentFormat ofmt = this.getOWLOntologyFormat();
		if (ofmt instanceof RDFXMLDocumentFormat) {
			response.setContentType("application/rdf+xml;charset-utf-8");
		}
		else if (ofmt instanceof OWLXMLDocumentFormat) {
			response.setContentType("application/xml;charset-utf-8");
		}
		else {
			response.setContentType("text/plain;charset-utf-8");
		}
	}
	else {
		response.setContentType("text/plain;charset-utf-8");
	}
	response.setStatus(HttpServletResponse.SC_OK);
}

开发者ID:owlcollab，项目名称:owltools，代码行数:20，代码来源:OWLHandler.java

示例3: testConversion

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
@Ignore
@Test
public void testConversion() throws Exception {
	ParserWrapper pw = new ParserWrapper();
	OWLOntology ont = pw.parse("http://purl.obolibrary.org/obo/go.owl");
	OWLGraphWrapper g = new OWLGraphWrapper(ont);

	GafObjectsBuilder builder = new GafObjectsBuilder();

	GafDocument gafdoc = builder.buildDocument("http://geneontology.org/gene-associations/gene_association.GeneDB_Spombe.gz");

	GAFOWLBridge bridge = new GAFOWLBridge(g);
	OWLOntology gafOnt = g.getManager().createOntology();
	bridge.setTargetOntology(gafOnt);
	bridge.translate(gafdoc);
	
	OWLDocumentFormat owlFormat = new RDFXMLDocumentFormat();
	g.getManager().saveOntology(gafOnt, owlFormat, IRI.create(new File("/tmp/gaf.owl")));
	
	for (OWLAxiom ax : gafOnt.getAxioms()) {
		//LOG.info("AX:"+ax);
	}

}

开发者ID:owlcollab，项目名称:owltools，代码行数:25，代码来源:PombeGAFOWLBridgeTest.java

示例4: testConversion

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
@Test
public void testConversion() throws Exception{
	ParserWrapper pw = new ParserWrapper();
	OWLOntology ont = pw.parse(getResourceIRIString("go_xp_predictor_test_subset.obo"));
	OWLGraphWrapper g = new OWLGraphWrapper(ont);
	g.addSupportOntology(pw.parse(getResourceIRIString("gorel.owl")));

	GafObjectsBuilder builder = new GafObjectsBuilder();

	GafDocument gafdoc = builder.buildDocument(getResource("xp_inference_test.gaf"));

	GAFOWLBridge bridge = new GAFOWLBridge(g);
	OWLOntology gafOnt = g.getManager().createOntology();
	bridge.setTargetOntology(gafOnt);
	bridge.translate(gafdoc);
	
	OWLDocumentFormat owlFormat = new RDFXMLDocumentFormat();
	g.getManager().saveOntology(gafOnt, owlFormat, IRI.create(new File("/tmp/gaf.owl")));
	
	for (OWLAxiom ax : gafOnt.getAxioms()) {
		LOG.info("AX:"+ax);
	}

}

开发者ID:owlcollab，项目名称:owltools，代码行数:25，代码来源:GAFOWLBridgeTest.java

示例5: testConversion

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
@Test
public void testConversion() throws Exception{
	ParserWrapper pw = new ParserWrapper();
	OWLOntology ont = pw.parse(getResourceIRIString("go_xp_predictor_test_subset.obo"));
	OWLGraphWrapper g = new OWLGraphWrapper(ont);
	g.addSupportOntology(pw.parse(getResourceIRIString("gorel.owl")));

	GafObjectsBuilder builder = new GafObjectsBuilder();

	GafDocument gafdoc = builder.buildDocument(getResource("xp_inference_test.gaf"));

	BasicABox bridge = new BasicABox(g);
	OWLOntology gafOnt = g.getManager().createOntology();
	bridge.setTargetOntology(gafOnt);
	bridge.translate(gafdoc);
	
	OWLDocumentFormat owlFormat = new RDFXMLDocumentFormat();
	g.getManager().saveOntology(gafOnt, owlFormat, IRI.create(new File("target/foo.owl")));
	
	for (OWLAxiom ax : gafOnt.getAxioms()) {
		LOG.info("AX:"+ax);
	}

}

开发者ID:owlcollab，项目名称:owltools，代码行数:25，代码来源:BasicAboxBridgeTest.java

示例6: testConversion

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
@Test
public void testConversion() throws Exception{
	ParserWrapper pw = new ParserWrapper();
	OWLOntology ont = pw.parse(getResourceIRIString("go_xp_predictor_test_subset.obo"));
	OWLGraphWrapper g = new OWLGraphWrapper(ont);
	g.addSupportOntology(pw.parse(getResourceIRIString("gorel.owl")));

	GafObjectsBuilder builder = new GafObjectsBuilder();

	GafDocument gafdoc = builder.buildDocument(getResource("mgi-exttest.gaf"));

	GAFOWLBridge bridge = new GAFOWLBridge(g);
	bridge.setGenerateIndividuals(false);
	OWLOntology gafOnt = g.getManager().createOntology();
	bridge.setTargetOntology(gafOnt);
	bridge.translate(gafdoc);
	
	OWLDocumentFormat owlFormat = new RDFXMLDocumentFormat();
	g.getManager().saveOntology(gafOnt, owlFormat, IRI.create(new File("target/gaf.owl")));
	
	for (OWLAxiom ax : gafOnt.getAxioms()) {
		//LOG.info("AX:"+ax);
	}

}

开发者ID:owlcollab，项目名称:owltools，代码行数:26，代码来源:MgiGAFOWLBridgeTest.java

示例7: testConversionToIndividuals

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
@Test
public void testConversionToIndividuals() throws Exception{
	ParserWrapper pw = new ParserWrapper();
	OWLOntology ont = pw.parse(getResourceIRIString("go_xp_predictor_test_subset.obo"));
	OWLGraphWrapper g = new OWLGraphWrapper(ont);
	g.addSupportOntology(pw.parse(getResourceIRIString("gorel.owl")));

	GafObjectsBuilder builder = new GafObjectsBuilder();

	GafDocument gafdoc = builder.buildDocument(getResource("mgi-exttest.gaf"));

	GAFOWLBridge bridge = new GAFOWLBridge(g);
	bridge.setGenerateIndividuals(false);
	OWLOntology gafOnt = g.getManager().createOntology();
	bridge.setTargetOntology(gafOnt);
	bridge.setBasicAboxMapping(true);
	bridge.translate(gafdoc);
	
	OWLDocumentFormat owlFormat = new RDFXMLDocumentFormat();
	g.getManager().saveOntology(gafOnt, owlFormat, IRI.create(new File("target/gaf-abox.owl")));
	
	for (OWLAxiom ax : gafOnt.getAxioms()) {
		//LOG.info("AX:"+ax);
	}

}

开发者ID:owlcollab，项目名称:owltools，代码行数:27，代码来源:MgiGAFOWLBridgeTest.java

示例8: getSuffix

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
private String getSuffix(OWLDocumentFormat format) {
	if (format instanceof RDFXMLDocumentFormat) {
		return "owl";
	}
	if (format instanceof FunctionalSyntaxDocumentFormat) {
		return "ofn";
	}
	if (format instanceof OWLXMLDocumentFormat) {
		return "owx";
	}
	if (format instanceof ManchesterSyntaxDocumentFormat) {
		return "omn";
	}

	return "owl";
}

开发者ID:owlcollab，项目名称:owltools，代码行数:17，代码来源:BridgeExtractor.java

示例9: parseImports

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
/**
         * Method that uses the loaded ontology and parses it in case there are imports that have not been considered
         * @param considerImportedOntologies
         * @param manager
         * @param ontology
         * @return
         * @throws OWLOntologyCreationException
         * @throws OWLOntologyStorageException
         * @throws URISyntaxException 
         */
	private static String parseImports(
                        boolean considerImportedOntologies, 
                        OWLOntologyManager manager,
                        OWLOntology ontology) 
	throws OWLOntologyCreationException, OWLOntologyStorageException, URISyntaxException {
            String result = "";
            if (considerImportedOntologies) {
                //considerImportedClosure || //<- removed for the moment
                Set<OWLOntology> setOfImportedOntologies = new HashSet<OWLOntology>();
                setOfImportedOntologies.addAll(ontology.getDirectImports());
//                else {
//                        setOfImportedOntologies.addAll(ontology.getImportsClosure());
//                }
                for (OWLOntology importedOntology : setOfImportedOntologies) {
                        manager.addAxioms(ontology, importedOntology.getAxioms());
                }
            }
            OWLOntologyDocumentTarget parsedOntology = new StringDocumentTarget();
            manager.saveOntology(ontology,new RDFXMLDocumentFormat(), parsedOntology);
            result = parsedOntology.toString();
//		}

            return result;
	}

开发者ID:dgarijo，项目名称:Widoco，代码行数:35，代码来源:LODEGeneration.java

示例10: saveOntology

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
static void saveOntology(OWLOntology ontology, File file) throws Exception {
    if (file.getName().endsWith(".ttl")) {
        manager.saveOntology(ontology, new TurtleDocumentFormat(), new FileOutputStream(file));
    } else if (file.getName().endsWith(".xml")) {
        manager.saveOntology(ontology, new OWLXMLDocumentFormat(), new FileOutputStream(file));
    } else {
        manager.saveOntology(ontology, new RDFXMLDocumentFormat(), new FileOutputStream(file));
    }
}

开发者ID:onprom，项目名称:onprom，代码行数:10，代码来源:OWLUtility.java

示例11: initializeFormat

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
/**
 * Initialize the format with standard default prefixes
 * (rdf, rdfs, xsd, owl) and with the prefixes we will use
 * (obo, oio, iao).
 *
 * @return The format with the prefixes set.
 */
protected static RDFXMLDocumentFormat initializeFormat() {
	RDFXMLDocumentFormat format = new RDFXMLDocumentFormat();
	format.copyPrefixesFrom(new DefaultPrefixManager());
	format.setPrefix("obo", OBO);
	format.setPrefix("oio", OIO);
	format.setPrefix("iao", IAO);
	format.setPrefix("ncbi", NCBI);
	format.setPrefix("ncbitaxon", OBO + "ncbitaxon#");
	return format;
}

开发者ID:owlcollab，项目名称:owltools，代码行数:18，代码来源:OWLConverter.java

示例12: expandLabel

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
private String expandLabel(String subject, String property,
		String value) {
	RDFXMLDocumentFormat format = OWLConverter.format;
	// TODO: Why is "Annotation" always doubled?
	return "AnnotationAssertion(" +
		property + " <" +
		format.getIRI(subject) + "> \"" +
		value +"\"^^xsd:string)";
}

开发者ID:owlcollab，项目名称:owltools，代码行数:10，代码来源:NCBI2OWLTest.java

示例13: expandAnnotation

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
private String expandAnnotation(String subject, String property,
		String value) {
	RDFXMLDocumentFormat format = OWLConverter.format;
	// TODO: Why is "Annotation" always doubled?
	return "AnnotationAssertion(<" +
		format.getIRI(property) + "> <" +
		format.getIRI(subject) + "> \"" +
		value +"\"^^xsd:string)";
}

开发者ID:owlcollab，项目名称:owltools，代码行数:10，代码来源:NCBI2OWLTest.java

示例14: expandSynonym

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
private String expandSynonym(String subject, String type, 
		String property, String value) {
	RDFXMLDocumentFormat format = OWLConverter.format;
	return "AnnotationAssertion(Annotation(<" +
		format.getIRI("oio:hasSynonymType").toString() + "> <" +
		format.getIRI(type).toString() + ">) <" +
		format.getIRI(property) + "> <" +
		format.getIRI(subject) + "> \"" +
		value +"\"^^xsd:string)";
}

开发者ID:owlcollab，项目名称:owltools，代码行数:11，代码来源:NCBI2OWLTest.java

示例15: saveOntology

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
public void saveOntology(String fn) throws FileNotFoundException, OWLOntologyStorageException {
	FileOutputStream os = new FileOutputStream(new File(fn));
	OWLDocumentFormat owlFormat = new RDFXMLDocumentFormat();

	owlOntologyManager.saveOntology(sourceOntology, owlFormat, os);
}

开发者ID:owlcollab，项目名称:owltools，代码行数:7，代码来源:OldSimpleOwlSim.java

示例16: saveBridgeOntologies

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
public void saveBridgeOntologies(String dir) throws FileNotFoundException, OWLOntologyStorageException {
	saveBridgeOntologies(dir, new RDFXMLDocumentFormat());
}

开发者ID:owlcollab，项目名称:owltools，代码行数:4，代码来源:BridgeExtractor.java

示例17: saveOWL

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
public void saveOWL(OWLOntology ont, String file) throws OWLOntologyStorageException, IOException {
    OWLDocumentFormat owlFormat = new RDFXMLDocumentFormat();
    saveOWL(ont, owlFormat, file);
}

开发者ID:owlcollab，项目名称:owltools，代码行数:5，代码来源:ParserWrapper.java

示例18: testRemove

import org.semanticweb.owlapi.formats.RDFXMLDocumentFormat; //导入依赖的package包/类
@Test
public void testRemove() throws Exception {
	ParserWrapper pw = new ParserWrapper();
	OWLGraphWrapper g = pw.parseToOWLGraph(getResourceIRIString("mooncat/remove-directives-test1.obo"));
	
	System.out.println(g.getSourceOntology().getAxioms(AxiomType.EQUIVALENT_CLASSES));
	OWLOntology secondary = pw.parse(getResourceIRIString("mooncat/remove-directives-test2.obo"));
       System.out.println(secondary.getAxioms(AxiomType.EQUIVALENT_CLASSES));
	g.addSupportOntology(secondary);
	
	Mooncat mooncat = new Mooncat(g);
	
	//mooncat.mergeOntologies();
	g.mergeOntology(secondary);
	
	OWLOntology merged = g.getSourceOntology();

	System.out.println(merged.getAxioms(AxiomType.EQUIVALENT_CLASSES));

	Owl2Obo owl2Obo = new Owl2Obo();
	OBODoc mergedObo = owl2Obo.convert(merged);
	
	if (USE_SYSTEM_OUT) {
		System.out.println("------------------------");
		OWLOntologyManager manager = merged.getOWLOntologyManager();
		OWLOntologyDocumentTarget documentTarget = new SystemOutDocumentTarget();
		manager.saveOntology(merged, new RDFXMLDocumentFormat(), documentTarget);
		System.out.println("------------------------");
		String oboString = renderOBOtoString(mergedObo);
		System.out.println(oboString);
		System.out.println("------------------------");
	}
	
	Frame headerFrame = mergedObo.getHeaderFrame();
	String owlAxiomString = headerFrame.getTagValue(OboFormatTag.TAG_OWL_AXIOMS, String.class);
	assertNotNull(owlAxiomString);
	
	
	Frame frame = mergedObo.getTermFrame("X:1");
	Collection<Clause> clauses = frame.getClauses(OboFormatTag.TAG_INTERSECTION_OF);
	assertEquals(2, clauses.size());
}

开发者ID:owlcollab，项目名称:owltools，代码行数:43，代码来源:RemoveDirectivesTest.java

注：本文中的org.semanticweb.owlapi.formats.RDFXMLDocumentFormat类示例整理自Github/MSDocs等源码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。

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Java RDFXMLDocumentFormat类代码示例

示例1: export

示例2: headerOWL

示例3: testConversion

示例4: testConversion

示例5: testConversion

示例6: testConversion

示例7: testConversionToIndividuals

示例8: getSuffix

示例9: parseImports

示例10: saveOntology

示例11: initializeFormat

示例12: expandLabel

示例13: expandAnnotation

示例14: expandSynonym

示例15: saveOntology

示例16: saveBridgeOntologies

示例17: saveOWL

示例18: testRemove

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Java RDFXMLDocumentFormat类代码示例

示例1: export

示例2: headerOWL

示例3: testConversion

示例4: testConversion

示例5: testConversion

示例6: testConversion

示例7: testConversionToIndividuals

示例8: getSuffix

示例9: parseImports

示例10: saveOntology

示例11: initializeFormat

示例12: expandLabel

示例13: expandAnnotation

示例14: expandSynonym

示例15: saveOntology

示例16: saveBridgeOntologies

示例17: saveOWL

示例18: testRemove

请发表评论

全部评论

上一篇：

下一篇：

dphi-official/Machine_Learning_Bootcamp

tianli/matlab_offscreen: Matlab offscree

win7系统注册表编辑器打开的操作方法

これがマストドンだ！ 使い方からインスタ

芙蓉王（硬领航）多少钱一包？

剪的笔顺,诠释剪的笔画,认识剪的部首

六六分期app的软件客服如何联系？(六六分期

florent37/ViewAnimator: A fluent Android

florent37/Shrine-MaterialDesign2: implem

CVE-2020-36276

SimpleSoftwareIO/simple-sms: Send and re

关于我们

产品与服务

解决方案

139-2527-9053

これがマストドンだ！使い方からインスタ