Java Value类代码示例

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本文整理汇总了Java中com.google.protobuf.Value类的典型用法代码示例。如果您正苦于以下问题：Java Value类的具体用法？Java Value怎么用？Java Value使用的例子？那么恭喜您, 这里精选的类代码示例或许可以为您提供帮助。

Value类属于com.google.protobuf包，在下文中一共展示了Value类的20个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于我们的系统推荐出更棒的Java代码示例。

示例1: doMerge

import com.google.protobuf.Value; //导入依赖的package包/类
@Override
public void doMerge(JsonParser parser, int currentDepth, Message.Builder messageBuilder)
    throws IOException {
  Value.Builder builder = (Value.Builder) messageBuilder;
  JsonToken token = parser.currentToken();
  if (token.isBoolean()) {
    builder.setBoolValue(ParseSupport.parseBool(parser));
  } else if (token.isNumeric()) {
    builder.setNumberValue(ParseSupport.parseDouble(parser));
  } else if (token == JsonToken.VALUE_NULL) {
    builder.setNullValue(NullValue.NULL_VALUE);
  } else if (token.isScalarValue()) {
    builder.setStringValue(ParseSupport.parseString(parser));
  } else if (token == JsonToken.START_OBJECT) {
    Struct.Builder structBuilder = builder.getStructValueBuilder();
    StructMarshaller.INSTANCE.mergeValue(parser, currentDepth + 1, structBuilder);
  } else if (token == JsonToken.START_ARRAY) {
    ListValue.Builder listValueBuilder = builder.getListValueBuilder();
    ListValueMarshaller.INSTANCE.mergeValue(parser, currentDepth + 1, listValueBuilder);
  } else {
    throw new IllegalStateException("Unexpected json data: " + parser.getText());
  }
}

开发者ID:curioswitch，项目名称:curiostack，代码行数:24，代码来源:WellKnownTypeMarshaller.java

示例2: doWrite

import com.google.protobuf.Value; //导入依赖的package包/类
@Override
public void doWrite(Value message, JsonGenerator gen) throws IOException {
  switch (message.getKindCase()) {
    case NULL_VALUE:
      SerializeSupport.printNull(0, gen);
      break;
    case NUMBER_VALUE:
      SerializeSupport.printDouble(message.getNumberValue(), gen);
      break;
    case STRING_VALUE:
      SerializeSupport.printString(message.getStringValue(), gen);
      break;
    case BOOL_VALUE:
      SerializeSupport.printBool(message.getBoolValue(), gen);
      break;
    case STRUCT_VALUE:
      StructMarshaller.INSTANCE.writeValue(message.getStructValue(), gen);
      break;
    case LIST_VALUE:
      ListValueMarshaller.INSTANCE.writeValue(message.getListValue(), gen);
      break;
    case KIND_NOT_SET:
      SerializeSupport.printNull(0, gen);
      break;
  }
}

开发者ID:curioswitch，项目名称:curiostack，代码行数:27，代码来源:WellKnownTypeMarshaller.java

示例3: anyInMaps

import com.google.protobuf.Value; //导入依赖的package包/类
@Test
public void anyInMaps() throws Exception {
  TestAny.Builder testAny = TestAny.newBuilder();
  testAny.putAnyMap("int32_wrapper", Any.pack(Int32Value.newBuilder().setValue(123).build()));
  testAny.putAnyMap("int64_wrapper", Any.pack(Int64Value.newBuilder().setValue(456).build()));
  testAny.putAnyMap("timestamp", Any.pack(Timestamps.parse("1969-12-31T23:59:59Z")));
  testAny.putAnyMap("duration", Any.pack(Durations.parse("12345.1s")));
  testAny.putAnyMap("field_mask", Any.pack(FieldMaskUtil.fromString("foo.bar,baz")));
  Value numberValue = Value.newBuilder().setNumberValue(1.125).build();
  Struct.Builder struct = Struct.newBuilder();
  struct.putFields("number", numberValue);
  testAny.putAnyMap("struct", Any.pack(struct.build()));
  Value nullValue = Value.newBuilder().setNullValue(NullValue.NULL_VALUE).build();
  testAny.putAnyMap(
      "list_value",
      Any.pack(ListValue.newBuilder().addValues(numberValue).addValues(nullValue).build()));
  testAny.putAnyMap("number_value", Any.pack(numberValue));
  testAny.putAnyMap("any_value_number", Any.pack(Any.pack(numberValue)));
  testAny.putAnyMap("any_value_default", Any.pack(Any.getDefaultInstance()));
  testAny.putAnyMap("default", Any.getDefaultInstance());

  assertMatchesUpstream(testAny.build(), TestAllTypes.getDefaultInstance());
}

开发者ID:curioswitch，项目名称:curiostack，代码行数:24，代码来源:MessageMarshallerTest.java

示例4: newTestLogEntry

import com.google.protobuf.Value; //导入依赖的package包/类
private static LogEntry.Builder newTestLogEntry(String name, int responseCode) {
  Value.Builder vb = Value.newBuilder();
  Map<String, Value> values = Maps.newHashMap();
  values.put("api_key", vb.setStringValue(TEST_API_KEY).build());
  values.put("http_method", vb.setStringValue("GET").build());
  values.put("timestamp",
      vb.setNumberValue(TEST_CLOCK.currentTimeMillis()).build());
  values.put("http_response_code", vb.setNumberValue(responseCode).build());
  values.put("response_size", vb.setNumberValue(TEST_SIZE).build());
  values.put("request_size", vb.setNumberValue(TEST_SIZE).build());
  if (responseCode >= 400) {
    values.put("error_cause", vb.setStringValue("internal").build());
  }
  return LogEntry
      .newBuilder()
      .setStructPayload(Struct.newBuilder().putAllFields(values))
      .setName(name)
      .setSeverity(responseCode >= 400 ? LogSeverity.ERROR : LogSeverity.INFO)
      .setTimestamp(REALLY_EARLY);
}

开发者ID:cloudendpoints，项目名称:endpoints-management-java，代码行数:21，代码来源:ReportRequestInfoTest.java

示例5: createTypedValue

import com.google.protobuf.Value; //导入依赖的package包/类
private static Value createTypedValue(VCFHeaderLineType type, Object value) {
  if (type == VCFHeaderLineType.Flag) {
    return Value.newBuilder().setBoolValue((Boolean) value).build();
  }

  // Booleans are given as Boolean objects. Strangely, Floats and Integers
  // are given as String objects by HTSJDK.
  if (!(value instanceof String)) {
    throw new IllegalStateException("Received non-Boolean, non-List type in non-String format. "
        + "This is most likely due to a change in htsjdk's library.");
  }

  String stringValue = (String) value;
  boolean isNumeric = stringValue.matches("[-+]?\\d+(\\.\\d+)?");

  if (type == VCFHeaderLineType.Integer && isNumeric) {
    return Value.newBuilder().setNumberValue(Integer.parseInt(stringValue)).build();
  }

  if (type == VCFHeaderLineType.Float && isNumeric) {
    return Value.newBuilder().setNumberValue(Double.parseDouble(stringValue)).build();
  }


  return Value.newBuilder().setStringValue(stringValue).build();
}

开发者ID:verilylifesciences，项目名称:genomewarp，代码行数:27，代码来源:VcfToVariant.java

示例6: parseInlineGenotypeFields

import com.google.protobuf.Value; //导入依赖的package包/类
private static boolean parseInlineGenotypeFields(String field, VariantCall.Builder vcBuilder,
    ListValue.Builder lvBuilder, IntGenotypeFieldAccessors.Accessor accessor, Genotype g) {

  final int[] intValues = accessor.getValues(g);
  if (intValues == null || intValues.length == 0) {
    return false;
  }

  if (field.equals(VCFConstants.GENOTYPE_PL_KEY)) {
    // HTSJDK folds GL's into PL's. We only use PL's to store genotype likelihood.
    for (int i = 0; i < intValues.length; i++) {
      // We add 0.0 to remove the possiblity of getting -0.0.
      vcBuilder.addGenotypeLikelihood(-(double) intValues[i] / 10.0 + 0.0);
    }
    return false;
  }

  for (int i = 0; i < intValues.length; i++) {
    lvBuilder.addValues(Value.newBuilder().setNumberValue(intValues[i]));
  }
  return true;
}

开发者ID:verilylifesciences，项目名称:genomewarp，代码行数:23，代码来源:VcfToVariant.java

示例7: testGetAlleleFreq

import com.google.protobuf.Value; //导入依赖的package包/类
@Test
public void testGetAlleleFreq() throws Exception {
  DoFnTester<Variant, KV<Position, AlleleFreq>> getAlleleFreq = DoFnTester.of(
      new GetAlleleFreq());
  Position pos = Position.newBuilder()
      .setReferenceName("1")
      .setPosition(123L)
      .build();
  Variant.Builder vBuild = Variant.newBuilder()
      .setReferenceName("1")
      .setStart(123L)
      .setReferenceBases("C")
      .addAlternateBases("T");
  vBuild.getMutableInfo().put("AF", ListValue.newBuilder()
      .addValues(Value.newBuilder().setStringValue("0.25").build()).build());
  AlleleFreq af = new AlleleFreq();
  af.setAltBases(Lists.newArrayList("T"));
  af.setRefBases("C");
  af.setRefFreq(0.25);
  Assert.assertThat(getAlleleFreq.processBundle(vBuild.build()),
      CoreMatchers.hasItems(KV.of(pos, af)));
}

开发者ID:googlegenomics，项目名称:dataflow-java，代码行数:23，代码来源:VerifyBamIdTest.java

示例8: onNext

import com.google.protobuf.Value; //导入依赖的package包/类
@Override
public void onNext(T value) {
  List<Value> path =
      dataFetchingEnvironment
          .getFieldTypeInfo()
          .getPath()
          .toList()
          .stream()
          .map(
              p ->
                  p instanceof Number
                      ? Value.newBuilder()
                          .setNumberValue(Double.parseDouble(p.toString()))
                          .build()
                      : Value.newBuilder().setStringValue(p.toString()).build())
          .collect(ImmutableList.toImmutableList());

  ListValue pathListVale =
      ListValue.newBuilder()
          .addAllValues(path)
          .addValues(Value.newBuilder().setNumberValue(pathIndex.incrementAndGet()))
          .build();

  R graphQlResponse = getData(value, pathListVale);

  rejoinerStreamingContext.responseStreamObserver().onNext(graphQlResponse);

  try {
    System.out.println(
        "Streaming response as Json: " + JsonFormat.printer().print(graphQlResponse));
  } catch (InvalidProtocolBufferException e) {
    throw new RuntimeException(e);
  }
}

开发者ID:google，项目名称:rejoiner，代码行数:35，代码来源:GraphQlStreamObserver.java

示例9: struct

import com.google.protobuf.Value; //导入依赖的package包/类
@Test
public void struct() throws Exception {
  // Build a struct with all possible values.
  TestStruct.Builder builder = TestStruct.newBuilder();
  Struct.Builder structBuilder = builder.getStructValueBuilder();
  structBuilder.putFields("null_value", Value.newBuilder().setNullValueValue(0).build());
  structBuilder.putFields("number_value", Value.newBuilder().setNumberValue(1.25).build());
  structBuilder.putFields("string_value", Value.newBuilder().setStringValue("hello").build());
  Struct.Builder subStructBuilder = Struct.newBuilder();
  subStructBuilder.putFields("number_value", Value.newBuilder().setNumberValue(1234).build());
  structBuilder.putFields(
      "struct_value", Value.newBuilder().setStructValue(subStructBuilder.build()).build());
  ListValue.Builder listBuilder = ListValue.newBuilder();
  listBuilder.addValues(Value.newBuilder().setNumberValue(1.125).build());
  listBuilder.addValues(Value.newBuilder().setNullValueValue(0).build());
  structBuilder.putFields(
      "list_value", Value.newBuilder().setListValue(listBuilder.build()).build());
  TestStruct message = builder.build();
  assertMatchesUpstream(message);

  builder = TestStruct.newBuilder();
  builder.setValue(Value.newBuilder().setNullValueValue(0).build());
  message = builder.build();
  assertMatchesUpstream(message);

  builder = TestStruct.newBuilder();
  listBuilder = builder.getListValueBuilder();
  listBuilder.addValues(Value.newBuilder().setNumberValue(31831.125).build());
  listBuilder.addValues(Value.newBuilder().setNullValueValue(0).build());
  message = builder.build();
  assertMatchesUpstream(message);
}

开发者ID:curioswitch，项目名称:curiostack，代码行数:33，代码来源:MessageMarshallerTest.java

示例10: tensorToNDArray

import com.google.protobuf.Value; //导入依赖的package包/类
public static DefaultData tensorToNDArray(DefaultData data){
	if (data.getDataOneofCase() == DataOneofCase.TENSOR)
	{
		List<Double> valuesList = data.getTensor().getValuesList();
		List<Integer> shapeList = data.getTensor().getShapeList();
		
		DefaultData.Builder dataBuilder = DefaultData.newBuilder();
				
		int index=0;
		for (Iterator<String> i = data.getNamesList().iterator(); i.hasNext();){
			dataBuilder.setNames(index, i.next());
			index++;
		}
		
		ListValue.Builder b1 = ListValue.newBuilder();
		for (int i = 0; i < shapeList.get(0); ++i) {
			ListValue.Builder b2 = ListValue.newBuilder();
			for (int j = 0; j < shapeList.get(1); j++){
				b2.addValues(Value.newBuilder().setNumberValue(valuesList.get(i*shapeList.get(1))+j));
			}
			b1.addValues(Value.newBuilder().setListValue(b2.build()));
		}
		dataBuilder.setNdarray(b1.build());
		
		return dataBuilder.build();
		
	}
	else if (data.getDataOneofCase() == DataOneofCase.NDARRAY)
	{
		return data;
	}
	return null;
}

开发者ID:SeldonIO，项目名称:seldon-core，代码行数:34，代码来源:PredictorUtils.java

示例11: updateData

import com.google.protobuf.Value; //导入依赖的package包/类
public static DefaultData updateData(DefaultData oldData, INDArray newData){
		DefaultData.Builder dataBuilder = DefaultData.newBuilder();
		
		dataBuilder.addAllNames(oldData.getNamesList());
		
//		int index=0;
//		for (Iterator<String> i = oldData.getFeaturesList().iterator(); i.hasNext();){
//			dataBuilder.setFeatures(index, i.next());
//			index++;
//		}
		
		if (oldData.getDataOneofCase() == DataOneofCase.TENSOR){
			Tensor.Builder tBuilder = Tensor.newBuilder();
			List<Integer> shapeList = Arrays.stream(newData.shape()).boxed().collect(Collectors.toList());
			tBuilder.addAllShape(shapeList);
			
			for (int i=0; i<shapeList.get(0); ++i){
				for (int j=0; j<shapeList.get(1); ++j){
					tBuilder.addValues(newData.getDouble(i,j));
				}
			}
			dataBuilder.setTensor(tBuilder);
			return dataBuilder.build();
		}
		else if (oldData.getDataOneofCase() == DataOneofCase.NDARRAY){
			ListValue.Builder b1 = ListValue.newBuilder();
			for (int i = 0; i < newData.shape()[0]; ++i) {
				ListValue.Builder b2 = ListValue.newBuilder();
				for (int j = 0; j < newData.shape()[1]; j++){
					b2.addValues(Value.newBuilder().setNumberValue(newData.getDouble(i,j)));
				}
				b1.addValues(Value.newBuilder().setListValue(b2.build()));
			}
			dataBuilder.setNdarray(b1.build());
			return dataBuilder.build();
		}
		return null;
		
	}

开发者ID:SeldonIO，项目名称:seldon-core，代码行数:40，代码来源:PredictorUtils.java

示例12: defaultRequest

import com.google.protobuf.Value; //导入依赖的package包/类
@Test
public void defaultRequest() throws InvalidProtocolBufferException
{
	String[] features = {"a","b"};
	Double[] values = {1.0,2.0,1.5,2.2};
	DefaultData.Builder defB = DefaultData.newBuilder();
	defB.addAllNames( Arrays.asList(features) );
	defB.setTensor(Tensor.newBuilder().addShape(1).addShape(values.length).addAllValues(Arrays.asList(values)).build());
	SeldonMessage.Builder b = SeldonMessage.newBuilder();
	Value v;
	Value v1 = Value.newBuilder().setNumberValue(1.0).build();
	
	b.setData(defB.build()).setMeta(Meta.newBuilder().putTags("key", v1).build());
	SeldonMessage request = b.build();
	
	String json = ProtoBufUtils.toJson(request);
	
	System.out.println(json);
	
	SeldonMessage.Builder b2 = SeldonMessage.newBuilder();
	ProtoBufUtils.updateMessageBuilderFromJson(b2, json);
	
	SeldonMessage request2 = b2.build();
	
	String json2 = ProtoBufUtils.toJson(request2);
	
	System.out.println(json2);
	
	Assert.assertEquals(json, json2);
	
}

开发者ID:SeldonIO，项目名称:seldon-core，代码行数:32，代码来源:TestPredictionProto.java

示例13: testSimpleNDArrayCase

import com.google.protobuf.Value; //导入依赖的package包/类
@Test
public void testSimpleNDArrayCase() throws NoSuchMethodException, SecurityException, IllegalAccessException, IllegalArgumentException {
	List<SeldonMessage> predictorReturns = new ArrayList<>();
	String[] names = {"c","d"};
	
	Double[] values1 = {1.0,1.0};
	predictorReturns.add(SeldonMessage.newBuilder().setStatus(Status.newBuilder().setStatus(Status.StatusFlag.SUCCESS).build())
			.setData(DefaultData.newBuilder().addAllNames(Arrays.asList(names))
					.setNdarray(ListValue.newBuilder().addValues(Value.newBuilder().setListValue(ListValue.newBuilder()
							.addValues(Value.newBuilder().setNumberValue(values1[0]))
							.addValues(Value.newBuilder().setNumberValue(values1[1])).build())).build()).build()).build());
	
	Double[] values2 = {1.0,0.5};
	predictorReturns.add(SeldonMessage.newBuilder().setStatus(Status.newBuilder().setStatus(Status.StatusFlag.SUCCESS).build())
			.setData(DefaultData.newBuilder().addAllNames(Arrays.asList(names))
					.setNdarray(ListValue.newBuilder().addValues(Value.newBuilder().setListValue(ListValue.newBuilder()
							.addValues(Value.newBuilder().setNumberValue(values2[0]))
							.addValues(Value.newBuilder().setNumberValue(values2[1])).build())).build()).build()).build());
	
	Double[] values3 = {2.2,0.9};
	predictorReturns.add(SeldonMessage.newBuilder().setStatus(Status.newBuilder().setStatus(Status.StatusFlag.SUCCESS).build())
			.setData(DefaultData.newBuilder().addAllNames(Arrays.asList(names))
					.setNdarray(ListValue.newBuilder().addValues(Value.newBuilder().setListValue(ListValue.newBuilder()
							.addValues(Value.newBuilder().setNumberValue(values3[0]))
							.addValues(Value.newBuilder().setNumberValue(values3[1])).build())).build()).build()).build());
	
	AverageCombinerUnit averageCombinerUnit = new AverageCombinerUnit();

	SeldonMessage average = averageCombinerUnit.aggregate(predictorReturns, null);
	
	Assert.assertThat(average.getData().getNamesList().get(0),is(names[0]));
	
	Double[][] expected_values = {{(1.0+1.0+2.2)/3,(1.0+0.5+0.9)/3}};
	Assert.assertEquals(expected_values[0][0],average.getData().getNdarray().getValues(0).getListValue().getValues(0).getNumberValue(),1e-7);
}

开发者ID:SeldonIO，项目名称:seldon-core，代码行数:36，代码来源:AverageCombinerTest.java

示例14: createAdditionalServiceTypes

import com.google.protobuf.Value; //导入依赖的package包/类
/**
 * Creates additional types (Value, Struct and ListValue) to be added to the Service config.
 * TODO (guptasu): Fix this hack. Find a better way to add the predefined types.
 * TODO (guptasu): Add them only when required and not in all cases.
 */

static Iterable<Type> createAdditionalServiceTypes() {
  Map<String, DescriptorProto> additionalMessages = Maps.newHashMap();
  additionalMessages.put(Struct.getDescriptor().getFullName(),
      Struct.getDescriptor().toProto());
  additionalMessages.put(Value.getDescriptor().getFullName(),
      Value.getDescriptor().toProto());
  additionalMessages.put(ListValue.getDescriptor().getFullName(),
      ListValue.getDescriptor().toProto());
  additionalMessages.put(Empty.getDescriptor().getFullName(),
      Empty.getDescriptor().toProto());
  additionalMessages.put(Int32Value.getDescriptor().getFullName(),
      Int32Value.getDescriptor().toProto());
  additionalMessages.put(DoubleValue.getDescriptor().getFullName(),
      DoubleValue.getDescriptor().toProto());
  additionalMessages.put(BoolValue.getDescriptor().getFullName(),
      BoolValue.getDescriptor().toProto());
  additionalMessages.put(StringValue.getDescriptor().getFullName(),
      StringValue.getDescriptor().toProto());

  for (Descriptor descriptor : Struct.getDescriptor().getNestedTypes()) {
    additionalMessages.put(descriptor.getFullName(), descriptor.toProto());
  }

  // TODO (guptasu): Remove this hard coding. Without this, creation of Model from Service throws.
  // Needs investigation.
  String fileName = "struct.proto";
  List<Type> additionalTypes = Lists.newArrayList();
  for (String typeName : additionalMessages.keySet()) {
    additionalTypes.add(TypesBuilderFromDescriptor.createType(typeName,
        additionalMessages.get(typeName), fileName));
  }
  return additionalTypes;
}

开发者ID:googleapis，项目名称:api-compiler，代码行数:40，代码来源:TypesBuilderFromDescriptor.java

示例15: getKind

import com.google.protobuf.Value; //导入依赖的package包/类
private static String getKind(Value.KindCase kind) {
  switch (kind) {
      case NULL_VALUE: return "NULL_VALUE";
      case NUMBER_VALUE: return "NUMBER_VALUE";
      case STRING_VALUE: return "STRING_VALUE";
      case BOOL_VALUE: return "BOOL_VALUE";
      case STRUCT_VALUE: return "STRUCT_VALUE";
      case LIST_VALUE: return "LIST_VALUE";
      default: return "KIND_NOT_SET";
  }
}

开发者ID:verilylifesciences，项目名称:genomewarp，代码行数:12，代码来源:VariantToVcf.java

示例16: parseObject

import com.google.protobuf.Value; //导入依赖的package包/类
private static Object parseObject(String key, Value in, VCFHeaderLineType type) {
  // Case on type
  switch (in.getKindCase()) {
      case NULL_VALUE: throw new IllegalStateException(String.format("field %s contained "
          + "a null value", key));
      case NUMBER_VALUE: return getNumberValue(in.getNumberValue(), type);
      case STRING_VALUE: return in.getStringValue();
      case BOOL_VALUE: return (Boolean) in.getBoolValue();
      default: throw new IllegalStateException(String.format("field %s contained a %s type, which"
          + " is not supported by VariantToVcf", key, getKind(in.getKindCase())));
  }
}

开发者ID:verilylifesciences，项目名称:genomewarp，代码行数:13，代码来源:VariantToVcf.java

示例17: valueFromObject

import com.google.protobuf.Value; //导入依赖的package包/类
private static Value valueFromObject(Object v) {
  if (v instanceof Boolean) {
    return Value.newBuilder().setBoolValue((Boolean) v).build();
  }
  if (v instanceof Integer) {
    return Value.newBuilder().setNumberValue((Integer) v).build();
  }
  if (v instanceof Double) {
    return Value.newBuilder().setNumberValue((Double) v).build();
  }

  return Value.newBuilder().setStringValue((String) v).build();
}

开发者ID:verilylifesciences，项目名称:genomewarp，代码行数:14，代码来源:GenomeWarpTestUtils.java

示例18: testFilterVariantCallsFn_AllCallsRemoved

import com.google.protobuf.Value; //导入依赖的package包/类
@Test
public void testFilterVariantCallsFn_AllCallsRemoved() throws Exception {

  Map<String, ListValue> passingFilter = new HashMap<String, ListValue>();
  passingFilter.put(
      TransformNonVariantSegmentData.FILTER_FIELD,
      ListValue.newBuilder()
          .addValues(Value.newBuilder().setStringValue(TransformNonVariantSegmentData.PASSING_FILTER).build())
          .build());
  VariantCall passingCall = VariantCall.newBuilder().putAllInfo(passingFilter).build();

  Map<String, ListValue> failingFilter = new HashMap<String, ListValue>();
  failingFilter.put(
      TransformNonVariantSegmentData.FILTER_FIELD,
      ListValue.newBuilder()
          .addValues(Value.newBuilder().setStringValue("VQSRTrancheSNP99.90to100.00").build())
          .build());
  VariantCall failingCall = VariantCall.newBuilder().putAllInfo(failingFilter).build();

  DoFnTester<Variant, Variant> filterCallsFn = DoFnTester.of(new FilterCallsFn(true));
  List<Variant> filteredVariants = filterCallsFn.processBundle(
      Variant.newBuilder().setReferenceBases("T").addAlternateBases("A").addAllCalls(Arrays.asList(failingCall)).build(),
      Variant.newBuilder().setReferenceBases("G").addAlternateBases("C").addAllCalls(Arrays.asList(passingCall)).build());
  assertEquals(1, filteredVariants.size());

  // Non-variant segments are not filtered.
  filteredVariants = filterCallsFn.processBundle(
      Variant.newBuilder().setReferenceBases("T").addAllCalls(Arrays.asList(failingCall)).build(),
      Variant.newBuilder().setReferenceBases("G").addAlternateBases(VariantUtils.GATK_NON_VARIANT_SEGMENT_ALT)
        .addAllCalls(Arrays.asList(failingCall)).build());
  assertEquals(2, filteredVariants.size());
}

开发者ID:googlegenomics，项目名称:codelabs，代码行数:33，代码来源:TransformNonVariantSegmentDataTest.java

示例19: testFormatCalls

import com.google.protobuf.Value; //导入依赖的package包/类
@Test
public void testFormatCalls() throws Exception {

  Map depthInfo = new HashMap<String, List<String>>();
  depthInfo.put(
      TransformNonVariantSegmentData.DEPTH_FIELD,
      ListValue.newBuilder()
          .addValues(Value.newBuilder().setStringValue("30").build())
          .build());

  Map dotDepthInfo = new HashMap<String, List<String>>();
  dotDepthInfo.put(
      TransformNonVariantSegmentData.DEPTH_FIELD,
      ListValue.newBuilder()
          .addValues(Value.newBuilder().setStringValue(".").build())
          .build());

  VariantCall callWithValidDepth = VariantCall.newBuilder()
      .setCallSetName("hetAlt").addAllGenotype(Arrays.asList(0, 1))
      .putAllInfo(depthInfo)
      .build();

  VariantCall callWithDotDepth = VariantCall.newBuilder()
      .setCallSetName("homAlt").addAllGenotype(Arrays.asList(1, 1))
      .putAllInfo(dotDepthInfo)
      .build();

  Variant variant = Variant.newBuilder()
      .putAllInfo(FlagVariantsWithAmbiguousCallsFn.NO_AMBIGUOUS_CALLS_INFO)
      .addAllCalls(Arrays.asList(callWithValidDepth, callWithDotDepth))
      .build();

  DoFnTester<Variant, TableRow> formatVariantsFn = DoFnTester.of(new TransformNonVariantSegmentData.FormatVariantsFn(true, false, cohortMap));
  List<TableRow> rows = formatVariantsFn.processBundle(variant);
  assertEquals(1, rows.size());

  assertEquals("[{call_set_name=hetAlt, phaseset=, genotype=[0, 1], genotype_likelihood=[], FILTER=[], DP=30},"
      + " {call_set_name=homAlt, phaseset=, genotype=[1, 1], genotype_likelihood=[], FILTER=[], DP=null}]",
      rows.get(0).get("call").toString());
}

开发者ID:googlegenomics，项目名称:codelabs，代码行数:41，代码来源:TransformNonVariantSegmentDataTest.java

示例20: ValueMarshaller

import com.google.protobuf.Value; //导入依赖的package包/类
ValueMarshaller() {
  super(Value.getDefaultInstance());
}

开发者ID:curioswitch，项目名称:curiostack，代码行数:4，代码来源:WellKnownTypeMarshaller.java

注：本文中的com.google.protobuf.Value类示例整理自Github/MSDocs等源码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。

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Java Value类代码示例

示例1: doMerge

示例2: doWrite

示例3: anyInMaps

示例4: newTestLogEntry

示例5: createTypedValue

示例6: parseInlineGenotypeFields

示例7: testGetAlleleFreq

示例8: onNext

示例9: struct

示例10: tensorToNDArray

示例11: updateData

示例12: defaultRequest

示例13: testSimpleNDArrayCase

示例14: createAdditionalServiceTypes

示例15: getKind

示例16: parseObject

示例17: valueFromObject

示例18: testFilterVariantCallsFn_AllCallsRemoved

示例19: testFormatCalls

示例20: ValueMarshaller

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