本文整理汇总了Java中org.cytoscape.model.CyNetworkFactory类的典型用法代码示例。如果您正苦于以下问题：Java CyNetworkFactory类的具体用法？Java CyNetworkFactory怎么用？Java CyNetworkFactory使用的例子？那么恭喜您, 这里精选的类代码示例或许可以为您提供帮助。
CyNetworkFactory类属于org.cytoscape.model包，在下文中一共展示了CyNetworkFactory类的20个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于我们的系统推荐出更棒的Java代码示例。
示例1: setUp
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Before
public void setUp(CyNetworkFactory networkFactory, CyNetworkManager networkManager) {
networkView = NetworkTestUtil.createNetwork(networkFactory, networkManager);
CyNetwork network = networkView.getModel();
nodes = new HashMap<>();
nodes.put("n1", createNode(network, "n1", "cluster_1"));
nodes.put("n2", createNode(network, "n2", "cluster_1"));
nodes.put("n3", createNode(network, "n3", "cluster_1"));
nodes.put("n4", createNode(network, "n4", "cluster_2"));
nodes.put("n5", createNode(network, "n5", "cluster_2"));
nodes.put("n6", createNode(network, "n6", "cluster_3"));
nodes.put("n7", createNode(network, "n7", null));
nodes.put("n8", createNode(network, "n8", null));
nodes.put("n9", createNode(network, "n9", null));
}
开发者ID:BaderLab，项目名称:AutoAnnotateApp，代码行数:20，代码来源:TestCreateAnnotationSetTask.java
示例2: setUp
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Before
public void setUp(CyNetworkFactory networkFactory, CyNetworkManager networkManager) {
networkView = NetworkTestUtil.createNetwork(networkFactory, networkManager);
CyNetwork network = networkView.getModel();
nodes = new HashMap<>();
nodes.put("n1", createNode(network, "n1", "cluster_1"));
nodes.put("n2", createNode(network, "n2", "cluster_1"));
nodes.put("n3", createNode(network, "n3", "cluster_1"));
nodes.put("n4", createNode(network, "n4", "cluster_2"));
nodes.put("n5", createNode(network, "n5", "cluster_2"));
nodes.put("n6", createNode(network, "n6", "cluster_3"));
nodes.put("n7", createNode(network, "n7", "cluster_4"));
nodes.put("n8", createNode(network, "n8", "cluster_5"));
nodes.put("n9", createNode(network, "n9", "cluster_6"));
}
开发者ID:BaderLab，项目名称:AutoAnnotateApp，代码行数:20，代码来源:TestCreateAnnotationSetLimitTask.java
示例3: setUp
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Before
public void setUp(CyNetworkFactory networkFactory, CyNetworkManager networkManager) {
networkView = NetworkTestUtil.createNetwork(networkFactory, networkManager);
CyNetwork network = networkView.getModel();
createNode(network, "n1", "cluster_1");
createNode(network, "n2", "cluster_1");
createNode(network, "n3", "cluster_1");
createNode(network, "n4", "cluster_2");
createNode(network, "n5", "cluster_2");
createNode(network, "n6", "cluster_3");
createNode(network, "n7", "cluster_4");
createNode(network, "n8", "cluster_5");
createNode(network, "n9", "cluster_6");
}
开发者ID:BaderLab，项目名称:AutoAnnotateApp，代码行数:19，代码来源:TestSummaryNetworkAction.java
示例4: configureTest
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Override
protected void configureTest() {
TableTestSupport tableTestSupport = new TableTestSupport();
NetworkViewTestSupport networkViewTestSupport = new NetworkViewTestSupport();
bind(CyNetworkFactory.class).toInstance(networkViewTestSupport.getNetworkFactory());
bind(CyNetworkTableManager.class).toInstance(networkViewTestSupport.getNetworkTableManager());
bind(CyNetworkManager.class).toInstance(networkViewTestSupport.getNetworkManager());
bind(CyTableFactory.class).toInstance(tableTestSupport.getTableFactory());
bind(CyNetworkViewFactory.class).toInstance(networkViewTestSupport.getNetworkViewFactory());
TypeLiteral<TaskManager<?,?>> taskManager = new TypeLiteral<TaskManager<?,?>>(){};
bind(taskManager).annotatedWith(Names.named("sync")).to(SerialTestTaskManager.class);
bind(taskManager).annotatedWith(Names.named("dialog")).to(SerialTestTaskManager.class);
bind(LabelMakerManager.class).toInstance(mock(LabelMakerManager.class));
bind(IconManager.class).toInstance(mock(IconManager.class));
// Bind all AssistedInjection factories
install(ApplicationModule.createFactoryModule());
}
开发者ID:BaderLab，项目名称:AutoAnnotateApp，代码行数:20，代码来源:NetworkTestUtil.java
示例5: AdjNetworkReaderFactory
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
public AdjNetworkReaderFactory(final CyFileFilter adjFileFilter, final CyApplicationManager appMgr,
final CyNetworkViewFactory cyNetworkViewFactory, final CyNetworkFactory cyNetworkFactory,
final CyNetworkManager cyNetworkManager, final CyNetworkViewManager cyNetworkViewManager,
final CyRootNetworkManager cyRootNetworkManager, final CyTableFactory cyTableFactory,
final CyTableManager cyTableManager, final VisualMappingManager visMgr,
final CyEventHelper eventHelper) {
this.adjFileFilter = adjFileFilter;
this.appMgr = appMgr;
this.cyNetworkFactory = cyNetworkFactory;
this.cyNetworkViewFactory = cyNetworkViewFactory;
this.cyNetworkManager = cyNetworkManager;
this.cyNetworkViewManager = cyNetworkViewManager;
this.cyRootNetworkManager = cyRootNetworkManager;
this.cyTableFactory = cyTableFactory;
this.cyTableManager = cyTableManager;
this.visMgr = visMgr;
this.eventHelper = eventHelper;
}
开发者ID:srikanthBezawada，项目名称:AdjacencyMatrixExporter，代码行数:19，代码来源:AdjNetworkReaderFactory.java
示例6: AdjNetworkReader
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
public AdjNetworkReader(InputStream inputStream, String inputName,
CyApplicationManager appMgr, CyNetworkViewFactory networkViewFactory,
CyNetworkFactory networkFactory, CyNetworkManager networkMgr,
CyNetworkViewManager networkViewMgr, CyRootNetworkManager rootNetworkMgr,
CyTableFactory tableFactory, CyTableManager tableMgr,
VisualMappingManager visMgr, CyEventHelper eventHelper) {
super(inputStream, networkViewFactory, networkFactory, networkMgr, rootNetworkMgr);
this.inputStream = inputStream;
this.inputName = inputName;
this.appMgr = appMgr;
this.networkMgr = networkMgr;
this.networkViewMgr = networkViewMgr;
this.tableFactory = tableFactory;
this.tableMgr = tableMgr;
this.visMgr = visMgr;
this.eventHelper = eventHelper;
this.networkFactory = networkFactory;
this.networkViewFactory = networkViewFactory;
}
开发者ID:srikanthBezawada，项目名称:AdjacencyMatrixExporter，代码行数:20，代码来源:AdjNetworkReader.java
示例7: start
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Override
public void start(BundleContext context) throws Exception {
CyApplicationManager manager = getService(context, CyApplicationManager.class);
CySwingAppAdapter adapter = getService(context, CySwingAppAdapter.class);
CySwingApplication desktopApp = adapter.getCySwingApplication();
OpenBrowser openBrowser = getService(context,OpenBrowser.class);
CyEventHelper eventHelper = getService(context, CyEventHelper.class);
CyNetworkFactory networkFactory = getService(context, CyNetworkFactory.class);
CyNetworkManager networkManager = getService(context, CyNetworkManager.class);
CyNetworkViewFactory networkViewFactory = getService(context, CyNetworkViewFactory.class);
CyNetworkViewManager networkViewManager = getService(context, CyNetworkViewManager.class);
VisualMappingManager visualMappingManager = getService(context,VisualMappingManager.class);
Properties properties = new Properties();
SlimPanel slimPanel = new SlimPanel(manager, adapter, openBrowser, eventHelper, networkFactory, networkManager,
networkViewFactory, networkViewManager, visualMappingManager);
registerService(context, slimPanel, CytoPanelComponent.class, properties);
SlimscapePluginAction slimscapePluginAction = new SlimscapePluginAction(manager, adapter, desktopApp, slimPanel);
registerService(context, slimscapePluginAction, CyAction.class, properties);
}
开发者ID:passeridae，项目名称:SLiMscape，代码行数:23，代码来源:CyActivator.java
示例8: JGFNetworkReaderFactory
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
public JGFNetworkReaderFactory(final CyFileFilter cyFileFilter, final CyApplicationManager appMgr,
final CyNetworkViewFactory cyNetworkViewFactory, final CyNetworkFactory cyNetworkFactory,
final CyNetworkManager cyNetworkManager, final CyNetworkViewManager cyNetworkViewManager,
final CyRootNetworkManager cyRootNetworkManager, final CyTableFactory cyTableFactory,
final CyTableManager cyTableManager, final VisualMappingManager visMgr,
final CyEventHelper eventHelper, final GraphReader graphReader,
final GraphConverter belGraphConverter, final BELEvidenceMapper belEvidenceMapper) {
this.cyFileFilter = cyFileFilter;
this.appMgr = appMgr;
this.cyNetworkFactory = cyNetworkFactory;
this.cyNetworkViewFactory = cyNetworkViewFactory;
this.cyNetworkManager = cyNetworkManager;
this.cyNetworkViewManager = cyNetworkViewManager;
this.cyRootNetworkManager = cyRootNetworkManager;
this.cyTableFactory = cyTableFactory;
this.cyTableManager = cyTableManager;
this.visMgr = visMgr;
this.eventHelper = eventHelper;
this.graphReader = graphReader;
this.belGraphConverter = belGraphConverter;
this.belEvidenceMapper = belEvidenceMapper;
}
开发者ID:jsongraph，项目名称:jgf-app，代码行数:24，代码来源:JGFNetworkReaderFactory.java
示例9: start
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Override
public void start(BundleContext context) throws Exception {
CyApplicationManager cyApplicationManager = getService(context, CyApplicationManager.class);
CySwingApplication cySwingApplication = getService(context, CySwingApplication.class);
CyNetworkFactory cyNetworkFactory = getService(context, CyNetworkFactory.class);
CyNetworkManager cyNetMgr = getService(context,CyNetworkManager.class);
CyTableFactory tableFactory = getService(context, CyTableFactory.class);
CyNetworkViewManager cyNetViewMgr = getService(context, CyNetworkViewManager.class);
DialogTaskManager diagTaskManager = getService(context, DialogTaskManager.class);
CyNetworkViewFactory cyNetworkViewFactory = getService(context, CyNetworkViewFactory.class);
CyLayoutAlgorithmManager cyLayoutAlgorithmMgr = getService(context,CyLayoutAlgorithmManager.class);
VisualMappingManager visualMappingMgr = getService(context,VisualMappingManager.class);
plugin = new Plugin(cyApplicationManager,cySwingApplication,cyNetworkFactory,tableFactory,cyNetMgr,cyNetViewMgr,diagTaskManager,cyNetworkViewFactory,cyLayoutAlgorithmMgr,visualMappingMgr);
ConnectInstanceMenuAction connectAction = new ConnectInstanceMenuAction(cyApplicationManager,plugin);
SyncUpMenuAction syncUpAction = new SyncUpMenuAction(cyApplicationManager, plugin);
SyncDownMenuAction syncDownAction = new SyncDownMenuAction(cyApplicationManager, plugin);
registerAllServices(context, connectAction, new Properties());
registerAllServices(context, syncUpAction, new Properties());
registerAllServices(context, syncDownAction, new Properties());
}
开发者ID:gsummer，项目名称:cyNeo4j，代码行数:26，代码来源:CyActivator.java
示例10: SyncDownTaskFactory
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
public SyncDownTaskFactory(CyNetworkManager cyNetworkMgr,
boolean mergeInCurrent, CyNetworkFactory cyNetworkFactory,
String instanceLocation, String cypherURL,
String auth,
CyNetworkViewManager cyNetworkViewMgr,
CyNetworkViewFactory cyNetworkViewFactory,
CyLayoutAlgorithmManager cyLayoutAlgorithmMgr,
VisualMappingManager visualMappingMgr) {
super();
this.cyNetworkMgr = cyNetworkMgr;
this.mergeInCurrent = mergeInCurrent;
this.cyNetworkFactory = cyNetworkFactory;
this.instanceLocation = instanceLocation;
this.cypherURL = cypherURL;
this.auth = auth;
this.cyNetworkViewMgr = cyNetworkViewMgr;
this.cyNetworkViewFactory = cyNetworkViewFactory;
this.cyLayoutAlgorithmMgr = cyLayoutAlgorithmMgr;
this.visualMappingMgr = visualMappingMgr;
}
开发者ID:gsummer，项目名称:cyNeo4j，代码行数:21，代码来源:SyncDownTaskFactory.java
示例11: SyncDownTask
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
public SyncDownTask(boolean mergeInCurrent, String cypherURL,
String instanceLocation,
String auth,
CyNetworkFactory cyNetworkFactory,
CyNetworkManager cyNetworkMgr,
CyNetworkViewManager cyNetworkViewMgr,
CyNetworkViewFactory cyNetworkViewFactory,
CyLayoutAlgorithmManager cyLayoutAlgorithmMgr,
VisualMappingManager visualMappingMgr) {
super();
this.mergeInCurrent = mergeInCurrent;
this.cypherURL = cypherURL;
this.instanceLocation = instanceLocation;
this.auth = auth;
this.cyNetworkFactory = cyNetworkFactory;
this.cyNetworkMgr = cyNetworkMgr;
this.cyNetworkViewMgr = cyNetworkViewMgr;
this.cyNetworkViewFactory = cyNetworkViewFactory;
this.cyLayoutAlgorithmMgr = cyLayoutAlgorithmMgr;
this.visualMappingMgr = visualMappingMgr;
}
开发者ID:gsummer，项目名称:cyNeo4j，代码行数:22，代码来源:SyncDownTask.java
示例12: configure
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Override
protected void configure() {
// Bind cytoscape OSGi services
bindService(CyServiceRegistrar.class);
bindService(CyApplicationManager.class);
bindService(CySwingApplication.class);
bindService(CyNetworkManager.class);
bindService(CyNetworkViewFactory.class);
bindService(CyNetworkViewManager.class);
bindService(CyNetworkFactory.class);
bindService(IconManager.class);
bindService(CyLayoutAlgorithmManager.class);
bindService(CyGroupManager.class);
bindService(CyGroupFactory.class);
bindService(CyGroupAggregationManager.class);
bindService(CyGroupSettingsManager.class);
bindService(AvailableCommands.class);
bindService(CommandExecutorTaskFactory.class);
bindService(CySessionManager.class);
bindService(CyEventHelper.class);
bindService(OpenBrowser.class);
bindService(VisualMappingManager.class);
bindService(CyNetworkTableManager.class);
bindService(CyTableManager.class);
bindService(CyTableFactory.class);
bindService(FileUtil.class);
bindService(CyRootNetworkManager.class);
bindService(DialogTaskManager.class);
TypeLiteral<SynchronousTaskManager<?>> synchronousManager = new TypeLiteral<SynchronousTaskManager<?>>(){};
bind(synchronousManager).toProvider(service(synchronousManager).single());
bindService(AnnotationManager.class);
TypeLiteral<AnnotationFactory<ShapeAnnotation>> shapeFactory = new TypeLiteral<AnnotationFactory<ShapeAnnotation>>(){};
bind(shapeFactory).toProvider(service(shapeFactory).filter(ldap("(type=ShapeAnnotation.class)")).single());
TypeLiteral<AnnotationFactory<TextAnnotation>> textFactory = new TypeLiteral<AnnotationFactory<TextAnnotation>>(){};
bind(textFactory).toProvider(service(textFactory).filter(ldap("(type=TextAnnotation.class)")).single());
}
开发者ID:BaderLab，项目名称:AutoAnnotateApp，代码行数:39，代码来源:CytoscapeServiceModule.java
示例13: configureTest
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Override
protected void configureTest() {
NetworkTestSupport networkTestSupport = new NetworkTestSupport();
TableTestSupport tableTestSupport = new TableTestSupport();
bind(CyNetworkFactory.class).toInstance(networkTestSupport.getNetworkFactory());
bind(CyNetworkTableManager.class).toInstance(networkTestSupport.getNetworkTableManager());
bind(CyNetworkManager.class).toInstance(networkTestSupport.getNetworkManager());
bind(CyTableFactory.class).toInstance(tableTestSupport.getTableFactory());
bind(EventBus.class).toInstance(new EventBus());
TypeLiteral<LabelMakerFactory<?>> labelMakerFactoryType = new TypeLiteral<LabelMakerFactory<?>>() {};
Multibinder<LabelMakerFactory<?>> labelFactoryBinder = Multibinder.newSetBinder(binder(), labelMakerFactoryType);
labelFactoryBinder.addBinding().toInstance(mock(LabelMakerFactory.class));
}
开发者ID:BaderLab，项目名称:AutoAnnotateApp，代码行数:16，代码来源:TestModelPersistor.java
示例14: createNetwork
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
public static CyNetworkView createNetwork(CyNetworkFactory networkFactory, CyNetworkManager networkManager) {
CyNetworkView networkView = mock(CyNetworkView.class);
CyNetwork network = networkFactory.createNetwork();
networkManager.addNetwork(network);
when(networkView.getModel()).thenReturn(network);
network.getDefaultNodeTable().createColumn(CLUSTER_COL, String.class, false);
return networkView;
}
开发者ID:BaderLab，项目名称:AutoAnnotateApp，代码行数:9，代码来源:NetworkTestUtil.java
示例15: setup
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Before
public void setup(CyApplicationManager appManager, ModelManager modelManager, AnnotationRenderer renderer,
RemoveAllAnnotationsTask.Factory removeTaskFactory, DrawClusterTask.Factory drawTaskFactory,
EraseClusterTask.Factory eraseTaskFactory, SelectClusterTask.Factory selectTaskFactory) {
// set up stubbing
CyNetworkView networkView = mock(CyNetworkView.class);
when(appManager.getCurrentNetworkView()).thenReturn(networkView);
when(drawTaskFactory.create(any())).thenReturn(mock(DrawClusterTask.class));
when(removeTaskFactory.create(any())).thenReturn(mock(RemoveAllAnnotationsTask.class));
when(eraseTaskFactory.create(any())).thenReturn(mock(EraseClusterTask.class));
when(selectTaskFactory.create(any(), anyBoolean())).thenReturn(mock(SelectClusterTask.class));
NetworkTestSupport networkTestSupport = new NetworkTestSupport();
CyNetworkFactory networkFactory = networkTestSupport.getNetworkFactory();
CyNetworkManager networkManager = networkTestSupport.getNetworkManager();
CyNetwork network = networkFactory.createNetwork();
networkManager.addNetwork(network);
when(networkView.getModel()).thenReturn(network);
// create model fixture
NetworkViewSet nvs = modelManager.getNetworkViewSet(networkView);
AnnotationSet as = nvs.createAnnotationSet("as1", "lc1");
as.createCluster(createNodes(network,10), "cluster1", false);
as.createCluster(createNodes(network,10), "cluster2", false);
as.createCluster(createNodes(network,10), "cluster3", false);
nvs.select(as);
// Reset invocation counts from fixture initialization.
// Unfortunately reset() also resets the stubbing so we need to redo it.
reset(removeTaskFactory, drawTaskFactory, eraseTaskFactory, selectTaskFactory);
when(drawTaskFactory.create(any())).thenReturn(mock(DrawClusterTask.class));
when(removeTaskFactory.create(any())).thenReturn(mock(RemoveAllAnnotationsTask.class));
when(eraseTaskFactory.create(any())).thenReturn(mock(EraseClusterTask.class));
when(selectTaskFactory.create(any(), anyBoolean())).thenReturn(mock(SelectClusterTask.class));
}
开发者ID:BaderLab，项目名称:AutoAnnotateApp，代码行数:39，代码来源:TestRenderer.java
示例16: CyServices
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
public CyServices(CySwingApplication cySwingApplication,
TaskManager taskManager, OpenBrowser openBrowser,
CyNetworkManager networkManager,
CyApplicationManager applicationManager,
CyNetworkViewManager networkViewManager,
CyNetworkReaderManager networkViewReaderManager,
CyNetworkNaming naming, CyNetworkFactory networkFactory,
CyLayoutAlgorithmManager layoutManager, UndoSupport undoSupport,
VisualMappingManager mappingManager,
CyProperty<Properties> cyProperty,
CyNetworkViewFactory networkViewFactory,
CyRootNetworkManager rootNetworkManager )
{
this.cySwingApplication = cySwingApplication;
this.taskManager = taskManager;
this.openBrowser = openBrowser;
this.networkManager = networkManager;
this.applicationManager = applicationManager;
this.networkViewManager = networkViewManager;
this.networkViewReaderManager = networkViewReaderManager;
this.naming = naming;
this.networkFactory = networkFactory;
this.layoutManager = layoutManager;
this.undoSupport = undoSupport;
this.mappingManager = mappingManager;
this.cyProperty = cyProperty;
this.networkViewFactory = networkViewFactory;
this.rootNetworkManager = rootNetworkManager;
}
开发者ID:cytoscape，项目名称:biopax，代码行数:30，代码来源:CyServices.java
示例17: start
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
@Override
public void start(BundleContext context) throws Exception {
networkFactory = getService(context, CyNetworkFactory.class);
networkManager = getService(context, CyNetworkManager.class);
networkNaming = getService(context, CyNetworkNaming.class);
networkViewFactory = getService(context, CyNetworkViewFactory.class);
networkViewManager = getService(context, CyNetworkViewManager.class);
serviceRegistrar = getService(context, CyServiceRegistrar.class);
//Set up tabbed panel in Control Panel
CySwingApplication cytoscapeDesktopService = getService(context,CySwingApplication.class);
CyApplicationManager appManager = getService(context, CyApplicationManager.class);
OpenTaskFactory openTaskFactory = new OpenTaskFactory(cytoscapeDesktopService, serviceRegistrar, appManager);
Properties openTaskFactoryProps = new Properties();
openTaskFactoryProps.setProperty("preferredMenu", "Apps.SCODE");
openTaskFactoryProps.setProperty("title", "Open SCODE");
openTaskFactoryProps.setProperty("menuGravity","1.0");
registerService(context, openTaskFactory, TaskFactory.class, openTaskFactoryProps);
CloseTaskFactory closeTaskFactory = new CloseTaskFactory(cytoscapeDesktopService, serviceRegistrar);
Properties closeTaskFactoryProps = new Properties();
closeTaskFactoryProps.setProperty("preferredMenu", "Apps.SCODE");
closeTaskFactoryProps.setProperty("title", "Close SCODE");
closeTaskFactoryProps.setProperty("menuGravity","2.0");
registerService(context, closeTaskFactory, TaskFactory.class, closeTaskFactoryProps);
}
开发者ID:DataFusion4NetBio，项目名称:Paper16-SCODE，代码行数:33，代码来源:CyActivator.java
示例18: CreateNetwork
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
/**
* Constructor
* @param netMgr
* @param namingUtil
* @param cnf
* @param kddn
* @param experiment
*/
public CreateNetwork(final CyNetworkManager netMgr,
final CyNetworkNaming namingUtil,
final CyNetworkFactory cnf, KddnResults kddn,
KddnExperiment experiment){
this.netMgr = netMgr;
this.cnf = cnf;
this.namingUtil = namingUtil;
this.kddn = kddn;
this.experiment = experiment;
this.needPvalue = experiment.needPvalue;
this.twoCondition = experiment.twoCondition;
}
开发者ID:tianye03，项目名称:kddn-cytoscape，代码行数:21，代码来源:CreateNetwork.java
示例19: SyncDownNodeResponseHandler
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
public SyncDownNodeResponseHandler(String instanceLocation,
CyNetworkFactory cyNetworkFactory, CyNetworkManager cyNetworkMgr) {
super();
this.instanceLocation = instanceLocation;
this.cyNetworkFactory = cyNetworkFactory;
this.cyNetworkMgr = cyNetworkMgr;
}
开发者ID:gsummer，项目名称:cyNeo4j，代码行数:8，代码来源:SyncDownNodeResponseHandler.java
示例20: Plugin
import org.cytoscape.model.CyNetworkFactory; //导入依赖的package包/类
public Plugin(CyNetworkFactory cyNetFct,
CyNetworkManager cyNetMgr,
DialogTaskManager dialogTaskManager,
CyNetworkViewFactory networkViewFactory,
VisualMappingManager vmmServiceRef,
VisualStyleFactory visualStyleFactoryServiceRef,
VisualMappingFunctionFactory vmfFactoryC,
VisualMappingFunctionFactory vmfFactoryD,
VisualMappingFunctionFactory vmfFactoryP,
CyLayoutAlgorithmManager cyAlgorithmManager,
CyApplicationManager cyApplicationManager,
CyNetworkViewManager cyNetworkViewManager,
CySwingApplication cySwingApplication) {
extensionManager = new HashMap<CyNetwork, ExtensionManager>();
this.cyNetworkFactory = cyNetFct;
this.cyNetworkManager = cyNetMgr;
this.dialogTaskManager = dialogTaskManager;
this.cyNetworkViewFactory = networkViewFactory;
this.visualMappingManager = vmmServiceRef;
this.visualStyleFactory = visualStyleFactoryServiceRef;
this.visualMappingFunctionFactoryContinous = vmfFactoryC;
this.visualMappingFunctionFactoryDiscrete = vmfFactoryD;
this.visualMappingFunctionFactoryPassthrough = vmfFactoryP;
this.cyLayoutAlgorithmManager = cyAlgorithmManager;
this.cyApplicationManager = cyApplicationManager;
this.cyNetworkViewManager = cyNetworkViewManager;
this.cySwingApplication = cySwingApplication;
}
开发者ID:CyTargetLinker，项目名称:cytargetlinker，代码行数:30，代码来源:Plugin.java
注：本文中的org.cytoscape.model.CyNetworkFactory类示例整理自Github/MSDocs等源码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。 |
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